YALI0F14355g

Overview

Description weakly similar to uniprot|P36145 Saccharomyces cerevisiae YKR062W TFA2 TFIIE small subunit, involved in RNA polymerase II transcription initiation
Locus type CDS
Locus tag YALI0F14355g

Location

Species Yarrowia lipolytica Positions 1922989..1923897
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 909 (nuc.)
Previous locus YALI0F14333g Next locus YALI0F14377g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F14355g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F14355gYALI0F14355g_mRNA-001YALI0F14355g_CDS-001

Nucleotide sequence

 

>YALI0F14355g
ATGTCCTCCCTCGACAACCAGCTCTCTGCGTTTAAAAACAAGATCAAATCGGCGCCTACG
ATCAAGAAGCCGTCGTTTGTGGCTAAACGCAAGGAGGAGGAGGAGGGTGTTGGTGGTCAA
CAAAAGAAGCGTAAGGTGGTTCCGCCCGTGAACCCCTTCAATGAGAACGTTGGCCGCCAC
GCTGCTACACAGTTGATGCATGCTGTGGAGTACATCAAAAAGCAGGTTGGTGTTGTTCCG
ATCGAGAACATTCGATCATACCTGTCGCTGCAAAGCGCTGATTTCTTGGTGCCCCTATTG
AAGAAGATGGACCAGATGTCCTACAACGCTGTCCAGAGGGGATTTGAGTACATGCCCAAA
TTCAATATCCGTACCAAGGCACAGCTCATGGCATTTCTTAAGTCTCAACCTACAGCCAAG
GGTCTCAGCGTGCGCGATCTTAAGGACGGCTGGGCCGATTGTCTAGACAGTATCGAAGAG
CTTGAGCAGAGCGGAGATCTGATTGTTCTCCGTACCAAGAAGGAGAACTCACCAAGAATG
ATGTGGGCTAATATGGGTGGGCCAATCGGCATGGTTGATGGAGAGTTCCGGTCAATGTGG
TCACAGATCAAGGTCCCCGATGAGTCCGAGTTGCCGTCGAAGTTGGAAGAGGCTGGCCTC
AAGCCTACATCTGTGGATCCTGCCACTATCAAGAGCAACAAGGCCAACGGGAATGGTTCA
AAGAAACAAAAGAAGCCCCGTCGAAGCAAGATCACAAACACACATCTGGATGGTGTCCTC
AAGGATTACGGCAGATAGTTGGTCCGTACCTGAATATTCAAGGTCGCGCAGTTAAATAGG
CATCCAATTGGTGCCATCATATTATTTTATTACATTCATATAGCATAAGGAATCTTCCTG
TATTTACGA

Legend

Locus sequence
Up/downstream sequence

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Translation(s)

YALI0F14355g_CDS-001

Protein length: 266 aa.
Product: Conserved hypothetical protein

>YALI0F14355g_CDS-001 MSSLDNQLSAFKNKIKSAPTIKKPSFVAKRKEEEEGVGGQQKKRKVVPPVNPFNENVGRH
AATQLMHAVEYIKKQVGVVPIENIRSYLSLQSADFLVPLLKKMDQMSYNAVQRGFEYMPK
FNIRTKAQLMAFLKSQPTAKGLSVRDLKDGWADCLDSIEELEQSGDLIVLRTKKENSPRM
MWANMGGPIGMVDGEFRSMWSQIKVPDESELPSKLEEAGLKPTSVDPATIKSNKANGNGS
KKQKKPRRSKITNTHLDGVLKDYGR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG