YALI0F14245g

Overview

Description similar to uniprot|O74978 Schizosaccharomyces pombe Putative RNA-binding protein
Locus type CDS
Locus tag YALI0F14245g

Location

Species Yarrowia lipolytica Positions 1915539..1916498
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 960 (nuc.)
Previous locus YALI0F14223g Next locus YALI0F14267g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F14245g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F14245gYALI0F14245g_mRNA-001YALI0F14245g_CDS-001

Nucleotide sequence

 

>YALI0F14245g
ATGAAGTCCAGTGCATTAAAAAAGGGCCTCAAGTCCTCCAACGGAACCAAGAAGGTTGGA
GTGTCTAAGACCGCCACTAAGGTCGCTGCTCCCGCCACCTCCGACGATTTCTCCAAATTC
TCTTCCTCGGAGGACGAGGAACAGGATGAGGCTGGATTTGAGAGTAGTGACGACGAAGAG
GAGTTTGAGAATGGAGATGACGAGGATGAGACTATGGATGATACCCCTGCTACCGTCAAG
AAGACCGCAGTAGCCAAGTCCAATCGAGCTGCTGCTACCACAAAGGCATCCAAAAAGTCT
GGAACCGGCGTCATCTATCTGGGTCGAATCCCCCATGGTTTCTACGAGGAGCAGATGCAC
TCATATTTCAGCCAGTTTGGTGATATTTCTCGACTGCGTCTTTCCAGAAACAAGACTACC
GGTGCCTCCAAGCATTACGCCTTCATCGAGTTCGAGTCCAAGGAGGTGGCCCAGGTAGCT
GCCGAGACCATGAACAACTACCTGCTCTTCGGCCACATTCTTAAATGCAAGGTTGTTCCT
GACGATGAGGTTCACGAGGCTCTCTTTGAGGGAGCTAACAAGACTTTCCGAGTCCTGCCA
AGAGCTCAGGTTGCTCAGTACAAGAATGAGAGACCCCGATCCCGAGCAAAGTGGGACCAG
CTCAAGAAAGAGTCTGCATCTCTGCTCGATGCCAAGCTGAAGAAGCTTGGTGAGATGGGT
ATCGATTACAAGTACACCCCCGTCTCTGACGTCCGAGTGCCCAAGAAGGCTGCTGCCGGA
GTCGCCGAGGGTGCAAAGAAGAAGAAGCAGAGAACTTCTCTGGCTTAGTTTAGAAAGAAA
AGTCTCATGTTGGATCTTGGAGTCGGAATTATCTTATTGTTGCATGTCTCGTATATTTAT
GGGGAAACATATTACTACTAGTTAGGTCTAATAAACCTGTAATATTAATAATGAGCTTTA

Legend

Locus sequence
Up/downstream sequence

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Translation(s)

YALI0F14245g_CDS-001

Protein length: 276 aa.
Product: RNA-binding protein, putative

>YALI0F14245g_CDS-001 MKSSALKKGLKSSNGTKKVGVSKTATKVAAPATSDDFSKFSSSEDEEQDEAGFESSDDEE
EFENGDDEDETMDDTPATVKKTAVAKSNRAAATTKASKKSGTGVIYLGRIPHGFYEEQMH
SYFSQFGDISRLRLSRNKTTGASKHYAFIEFESKEVAQVAAETMNNYLLFGHILKCKVVP
DDEVHEALFEGANKTFRVLPRAQVAQYKNERPRSRAKWDQLKKESASLLDAKLKKLGEMG
IDYKYTPVSDVRVPKKAAAGVAEGAKKKKQRTSLA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG