YALI0F13497g

Overview

Description some similarities with uniprot|P47977 Saccharomyces cerevisiae YLR136C (ohnolog of YDR151C) TIS11 tRNA- specific adenosine deaminase 3
Locus type CDS
Locus tag YALI0F13497g

Location

Species Yarrowia lipolytica Positions 1807300..1808604
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1305 (nuc.)
Previous locus YALI0F13475g Next locus YALI0F13519g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F13497g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F13497gYALI0F13497g_mRNA-001YALI0F13497g_CDS-001

Nucleotide sequence

 

>YALI0F13497g
ATGCTCATGTCGTTTGAATACGGAGATGGAAAGGGCGGCAACCCAGCCAACCCGACCCAG
CAACCCCAGCACCCGCACCAGCACCAGCACCAGCACCAGCACTCGCTTCTGGCCCACCCG
AAACCCGTTTCGTTTGCATCTTCCACCGTCTCCTCCATGGACGGCTCGGCCCAGTCTTCA
CCTGTGGGATCCACCGCCGACCTGACCGCTAGTCAGAATGGAGCCGCTCCCGGCACCGGC
TCGTCTAAGCAGCACGACCGGCTCTTCAGCGGCTTCCTTTCACGTCCCACCTCCACTCGA
ATCTCGTCACCCTTCTCGCTCGGCATCAAGTCCGACATTTGGGGAGACGACTCCTCCACT
ACCTCCCAGACGTCGGCCTCGTCCACGTCCAAATTTGCTCCCTTCGAGGCCCCCACGCCC
TCAAGCTCCTCGGGCTCAACCGTGTCGCAGCCCGCAGCACCCGTGGCGCCTCAGCAGCAG
CAGCAGGGAGCTCCCCGACCTTCTGTCGTGGCCGCCATGTCGCAGGCCAACGACTTCCCA
GGCATCGACATCAGCTACCTTGACGACCCTGCGGCTGCCCCCGGCGCCGCTGGATCGGCC
CACTCGTCCAACTTTGCCACGCACACAAACTCGTCCGTGTCGCTGAGCGCTCTGGGCTAT
GGTACCGGCTTCGGCACCCCCACCTCGGCCACCGTGCCCCCCGGGGCTCCCAACGCTGCC
TACTTTGAGGAGTATCCCCAGCAGCCTTTTGATCCCTGGGGAGAAGACAAGCGACGTGGT
CACATGGGAGGACCCATGATGCAGCCTAACGTGCACCAGGCCAACGGCATGCCCCCCAAC
GGCATGCCCAACCCCATGGCCATGCAGCAGCCTCTTGCCAACGGGATGCACATGCAGGGC
ATGATGCCGCAGATGGCTCCCGTGACGCCTACTGCCGCCAACGCCGTGCCCCAGCAGCAG
CCCCGACGAAAGGCCAACATCAACTCCGAGCTGTACAAGACAGAGATGTGCTCGTCGTTC
CAGAAGACGGGCTCGTGCTCGTACGGCGAAAAGTGCCAGTTTGCCCACGGCGAACACGAG
TTGAAAAACGTGGACCGGCCGCCTAAGTGGCGCTCCAAGCTGTGCCAGAACTGGCTGCGG
ACCGGCACCTGCGCCTACAACGACAGATGTTGCTTCAAACATGCTTAAATTATATGGCGC
TACGCACGCTCAAGGACTTGACCATTCAGTTGACGACTCCTGGTTATTATTTATGTATAG
ATATTTATCATTGTAAATAGAATCTTTCTATCTTGCTTGTTTTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F13497g_CDS-001

Protein length: 396 aa.
Product: Conserved hypothetical protein

>YALI0F13497g_CDS-001 MLMSFEYGDGKGGNPANPTQQPQHPHQHQHQHQHSLLAHPKPVSFASSTVSSMDGSAQSS
PVGSTADLTASQNGAAPGTGSSKQHDRLFSGFLSRPTSTRISSPFSLGIKSDIWGDDSST
TSQTSASSTSKFAPFEAPTPSSSSGSTVSQPAAPVAPQQQQQGAPRPSVVAAMSQANDFP
GIDISYLDDPAAAPGAAGSAHSSNFATHTNSSVSLSALGYGTGFGTPTSATVPPGAPNAA
YFEEYPQQPFDPWGEDKRRGHMGGPMMQPNVHQANGMPPNGMPNPMAMQQPLANGMHMQG
MMPQMAPVTPTAANAVPQQQPRRKANINSELYKTEMCSSFQKTGSCSYGEKCQFAHGEHE
LKNVDRPPKWRSKLCQNWLRTGTCAYNDRCCFKHA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG