YALI0F13167g

Overview

Description some similarities with uniprot|D5G4H1 Tuber melanosporum hypothetical protein
Locus type CDS
Locus tag YALI0F13167g

Location

Species Yarrowia lipolytica Positions 1763362..1765330
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1969 (nuc.)
Previous locus YALI0F13160t Next locus YALI0F13189g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F13167g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F13167gYALI0F13167g_mRNA-001YALI0F13167g_CDS-001

Nucleotide sequence

 

>YALI0F13167g
ATGGCGCATATTGTGCATGCAGTGTCCCAAATACTCCACTTTTATACATCACCAAGTCCG
GTTCTTAAACTTAACCACCCATTCAACCACTCTCCACATCTACACAACGCCATGTCCGAC
TCGATGAAGTACGACCCGGTGCACGAGTCGCCGGAGACGCCGAAGAAGGAGGGGTCGCCT
GGATCGGCCAAAAAACGACAGTACCAGCCGCGATTGACCAACCCCAAGATTCTGCATCTC
AAGAAGAAGGACGGAGAGCCGCTGTGGCGAGTCGACATCCAGTTTGATTTTCTCAGCTGC
ATCTTCCGCAACGAAATGCGCGTCTTCAGCAACAGATACAACATGGAGGATCACAACGAA
TCGACGCCCAGACGAGGGGGATACACATTTGCCGATTGCTACATCAAAGCCATGGCCAAG
TCACCCAAATGCTCACGTGTGCTGCATGACAAGCTCATGGGTGACAGAGAAGCCGGTCTC
AATATGGCCATGGTGTGTCTGCTCGTCAACATTGGACGAATGAACACCACTCTGAACTTC
TTCCCCGAGATGAGAGCCCAGCTGCGAACCTATCATCCCATCCCCTCTCTGCAGAACTCC
AACTCCAAAAACGAGTACAAACAGCTGCAGGACGCACCTCGGTTGAAATCTATTCTCAAG
GGTGCCTGTGAGGGCAAGTCTGAACCCGACACCATCAACGCCATGATCTCCAACGGAGAA
GTGCCCCACTGCAACGCCATAAACCTTGTGTCGCTGTTGTCGTCCAACTCGGCCTTTGTG
AACGCCCGTTTCTTCTACGATCAATTTGAATTTTGCGACCTGATCATGGACGCCAATCTT
TCGTCTGCTTCTCGAGCTCAGGCCTTTTTGTGGCTTGCCTGGGCCTTTTTGGAAACCAAC
CTCGAGGAAGAAGAGCTCCTGCAGAACCCCTTTGGTTCGTCGACACAGATCCCAGAGCTC
GTGGAACTGCTGCCTCATGAAGCAGAGCTCGAGAATGTGGACACTGAAGAGGAGAAGGAG
TTTGCACAGCAGATGCGAGCAGTGCGGGAGGAGTACATCGAGTCTGTCTCCCAATCGCCT
ACCACTGTTGTTGTTGGAGGGCATGGGGGAGGCACCAAAATCAAGCCCGTGGCTTCGACT
GGACGACCGAAGAAGGAGGAAGAAACGCCCGTCAAGAAAGGCAAGACTTCTACTTCGTCT
ACAGCTCTTCCTGCACCCATCCAGAAGATCCCCCTGGCCCCTCTCGACTCAGCCCCTTCT
CAGTCGTTTGCAGAAATGTATCTTAAGGGCATCGAGTTTGAAAATGCTCGTCTTCCAAAG
GTGAAGCGAAACAAGGCTTCTCGTCTACGCGAAGACCACGCCACTGCAGTTGCCGTTCTT
GCCTGTCTGCAGCTTCCTAAGGCTGTCGCTGCCATTGAGCGGCTTTTGGAAAACACATCC
GAGGGTCTAGCAGGCAGTCATTGCGTCATTAAGCCTTCTTCCATCAAGACGCTCGAGCAG
CGACACAAAAAGTGTGTGGGCGAAGTGCGACACATCTTTAAGGTGCGCAAGGAGCGGGCT
CGAAAGAAGCGACGGAAGGCTATTCTTCCCGAAATTCCTTCAGATGAGGATGTGTTTGAT
TCTGACGACGATATGAAGGGCGGAATATGTGGCGGGGAAGCTGTTCGTGGGACTACGACG
ATTACCAAGGATGGCTTTGCGTACTCTACACACGGGTCTCTACAGTGGAATTCTGGATTG
CCTGCCGACTACGGCGAGAAGTTTGAGACTCGAGGCAAGGCTTTCCGGGCAGCCAGCTTG
TGGTGATTTCGAACGATTTCGACAGTATTTATTCAATAAGTGACTGAGATGGCAATACGT
GGTTGGAAGCACAGACGCAGTTGATGACTGGGGGCATTGCAAAGCTGATTAGTCATTTGG
ACGGTGGTGGTTGGCTGAGGGATTTGTAAGCCAAAGGGGAGTGTACTGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F13167g_CDS-001

Protein length: 602 aa.
Product: Conserved hypothetical protein

>YALI0F13167g_CDS-001 MAHIVHAVSQILHFYTSPSPVLKLNHPFNHSPHLHNAMSDSMKYDPVHESPETPKKEGSP
GSAKKRQYQPRLTNPKILHLKKKDGEPLWRVDIQFDFLSCIFRNEMRVFSNRYNMEDHNE
STPRRGGYTFADCYIKAMAKSPKCSRVLHDKLMGDREAGLNMAMVCLLVNIGRMNTTLNF
FPEMRAQLRTYHPIPSLQNSNSKNEYKQLQDAPRLKSILKGACEGKSEPDTINAMISNGE
VPHCNAINLVSLLSSNSAFVNARFFYDQFEFCDLIMDANLSSASRAQAFLWLAWAFLETN
LEEEELLQNPFGSSTQIPELVELLPHEAELENVDTEEEKEFAQQMRAVREEYIESVSQSP
TTVVVGGHGGGTKIKPVASTGRPKKEEETPVKKGKTSTSSTALPAPIQKIPLAPLDSAPS
QSFAEMYLKGIEFENARLPKVKRNKASRLREDHATAVAVLACLQLPKAVAAIERLLENTS
EGLAGSHCVIKPSSIKTLEQRHKKCVGEVRHIFKVRKERARKKRRKAILPEIPSDEDVFD
SDDDMKGGICGGEAVRGTTTITKDGFAYSTHGSLQWNSGLPADYGEKFETRGKAFRAASL
W*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG