YALI0F13123g

Overview

Description weakly similar to uniprot|P78955 Schizosaccharomyces pombe Protein hus1
Locus type CDS
Locus tag YALI0F13123g

Location

Species Yarrowia lipolytica Positions 1756298..1757239
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 942 (nuc.)
Previous locus YALI0F13101g Next locus YALI0F13145g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F13123g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F13123gYALI0F13123g_mRNA-001YALI0F13123g_CDS-001

Nucleotide sequence

 

>YALI0F13123g
ATGAAACTGAGGGTCAAACTGGACCGAATCTCGCTGCTGAGAGATGTTTTAAACGCAGCA
ATGGCCGTCCGCAAGGAGGCATACATCATCTTCGCCCCGACGGATGTGCGAATCGTATCG
CCAGCCTCCAATGACGGCACCACCATCTCGCTGTTCGCCTACTTCACCGTCGACTACCTG
TGTGATCCCAACCAGTACGTTTGTGTCAGTGCGTTTGACGACATGTGTGTGTTTTTGGTG
AGTCTGGACGACTTTGCCCGGGCCCTCAAAAGCTCTAGTTCGTATCACATGGACGAGGTA
CGGCTCAGCTTACGTCAGTACCAGGGTCTGTTGCAACTACAAGTGCGAATCACACAGCAT
CGAGAAAGAGGACCCACGGTGGTGACACACAATCTTCCGGTGGATCCACGGAAACTAGAG
GAGGAGAGCTACCTGCTGGTTCAGCCTGAAATCCAGCCACAGGTATACATCATGCTACCA
AAACCTACGCTGAACATCGCCAAGCTCAGTGAGCGATACAAGCGGTTGGGCAAGCTCGTA
ACATTAAGTGCCAATAACTCGGGGTGCTTAAAACTGTCTTTGGACGCGGTCGATGTCAAC
GTGGAGACGGACTGGAAGGGGCTAATGAACCCGCAGCTAGACGCAGGTGAACAGGAGGAA
GAACAGAGTCTACCATCTCAGGGATCGGGTCCCCATTCGTCACAGATTCGCTTCTCACAA
AACTTCACTGGGGAAAGCCGTGCAAAGCCGAACAGCTCCGAGTTTGCCACCGTGTCTATT
CCTTGCAAAGATTGGTGTTTACTCACCAACATGGCCCTAATTTGCGACAGTGTGGTTCTA
GCCATCAGCCACGAAAGAGTGCTGACAGCTTATTGTTACACGGACCACCCCGGAGACACC
AGCGGCTCTATCACTTATTACATGTCTCATATTGAGGAGTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F13123g_CDS-001

Protein length: 314 aa.
Product: Conserved hypothetical protein

>YALI0F13123g_CDS-001 MKLRVKLDRISLLRDVLNAAMAVRKEAYIIFAPTDVRIVSPASNDGTTISLFAYFTVDYL
CDPNQYVCVSAFDDMCVFLVSLDDFARALKSSSSYHMDEVRLSLRQYQGLLQLQVRITQH
RERGPTVVTHNLPVDPRKLEEESYLLVQPEIQPQVYIMLPKPTLNIAKLSERYKRLGKLV
TLSANNSGCLKLSLDAVDVNVETDWKGLMNPQLDAGEQEEEQSLPSQGSGPHSSQIRFSQ
NFTGESRAKPNSSEFATVSIPCKDWCLLTNMALICDSVVLAISHERVLTAYCYTDHPGDT
SGSITYYMSHIEE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG