YALI0F12859g

Overview

Description similar to uniprot|Q87P41 Vibrio parahaemolyticus Hypothetical protein
Locus type CDS
Locus tag YALI0F12859g
Pseudogene This locus may contain pseudogene(s)

Location

Species Yarrowia lipolytica Positions 1727920..1728830
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 911 (nuc.)
Previous locus YALI0F12837g Next locus YALI0F12881g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F12859g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F12859gYALI0F12859g_mRNA-001YALI0F12859g_CDS-001

Nucleotide sequence

 

>YALI0F12859g
ATGTCCAACATCTCCATCAAGAACAACAATGGCAACGGAATCACTCTGGCGGCTGTCGTC
AACAAGCCCCGGAACTTCGATGAGTCCAAAAAGTATCCCGCCGTGGTCGTGACTCATCCT
GGAGGAGGCGTCAAGGAGCAGACCGCGGGCACATACGCCAAGAAGCTCGCCGACGAGGGC
GACTTTGTCACCGTGGCCTCGATGCCTCCTACCAGGGCGCCTCTACTGGCGAGCCTCGTC
AGCTAGAGAACCCCCACGTTCGAACTGACGATATTAGCGCTGTTATTGACTACCTCGAGA
CCCAGTCGTTTGTTGACACCGGCAAAATTGGAGCCATGGGCGTCTGTGCCGGGGGAGGCT
ACACTGCCAACGCCGCCATCAACGACTCTCGAATCAAGGTCGTTGGCACCGTGTCGGCCG
TCAACATTGGCCAGATGTTCAGAAACGGCTGGGACGGCTCGGTCAAGGACGCGGACGCTG
CTCCTTACATCAAGGCTGGCTCGGACGCCCGAACCGCCCAGGCCAAGACTGGAGACATTG
GAACCGTCCCCCTGGCTCCTCTCAAGAAAGAAGACGCCCCCAACGAAGAGATGGTCGAGG
CCTGGGAGTACTATCACACTCCCCGAGCCGAGCACAAGAACTCGCCCGGCGTCATGACTG
CTCGATCACTGGCCCAGATCGTCCCCTACGATGCCTATAACAACGCCGAGGCCTTCCTGA
CCCAGCCTGTCCTTGTGGTGTATGGTGAAAACGCAGGCAGCAAGTGGATGTCCGAGGACC
TCGTCAAACGAGCCGCAGCCAAGGACAAGAGTTCACACGTCGTCAAGGATGCCAACCACA
TGGACCTCTATGACAAGAAGGTTGACGAAGTTGCCTCCAAGCTCTCCGACTTTTTCAAGA
AGCATCTCTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F12859g_CDS-001

Protein length: 303 aa.
Product: Conserved hypothetical protein

>YALI0F12859g_CDS-001 MSNISIKNNNGNGITLAAVVNKPRNFDESKKYPAVVVTHPGGGVKEQTAGTYAKKLADEG
DFVTVADASYQGASTGEPRQLENPHVRTDDISAVIDYLETQSFVDTGKIGAMGVCAGGGY
TANAAINDSRIKVVGTVSAVNIGQMFRNGWDGSVKDADAAPYIKAGSDARTAQAKTGDIG
TVPLAPLKKEDAPNEEMVEAWEYYHTPRAEHKNSPGVMTARSLAQIVPYDAYNNAEAFLT
QPVLVVYGENAGSKWMSEDLVKRAAAKDKSSHVVKDANHMDLYDKKVDEVASKLSDFFKK
HL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG