YALI0F12507g

Overview

Description weakly similar to uniprot|C4R0B8 Komagataella pastoris hypothetical protein
Locus type CDS
Locus tag YALI0F12507g

Location

Species Yarrowia lipolytica Positions 1668973..1670076
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1104 (nuc.)
Previous locus YALI0F12485r Next locus YALI0F12523r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F12507g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F12507gYALI0F12507g_mRNA-001YALI0F12507g_CDS-001

Nucleotide sequence

 

>YALI0F12507g
ATGCTCTCTCGACGTCTATTTTCCACTACGGCCGCTTTACGGGTCCCCTTTTCGGGTCCG
CTCGACATTGGTGCCATTACAGCTTACTCGGCCAAGCTGACGCCTTCTTCTTCAACTGAA
GACGTGGTTTCTGCCCTGCATGCTGCCAACAAGCTGGAACACACATACGCTGCCAGTGGG
CTTACTACGCAGGTTCACGAGGTGCGGGAGCTCATTGACAAGGTGCTGGACCTACCTGAA
AAGCCTTCGTTGGACATGCTGCAAAAGACGGTGTGTACTTCCAAGTACTACTCTCCTTGG
TTTGGAACCCGGGCTATGGAGGTGTGGCAACAAAAGAACCCAGACACCCCGATTCCCCGA
ACCGTGGCCATGGGTCCACTGCGAAAGGCGCTCTGGGAAACAGACTTCCCCGCAGCCTTC
AAGGTCGTCGACCTGTCGGCCGGCTCGCCTCAACACATCAAGTCCATCAAACAAAAGATG
CTTAAATACCTGGGCGTGTGGGGTCTGTTTGGCCTGAGCATCTCTGGTGCTGGAAAGGGG
CTCATGGCTGCCGATCTGCTGTTTGGTGTGGCCCCAGCAACCTTCCACATTCTCTGGTGG
GCTTATTTTGCCAACGTGTCCATCTTTTCGGTCATTTCAACTGCTGGTCGTTTCTGCGGC
AACGGAGAGGTGGTCAAGTGGATGCAGGGCACTTTCTACTCGCACTACTTTACCCACGCG
GACGAGATGAAAATGGTGTCTCGAATTGTCGAGATTGACCGACTTATGCCCGAAAACCAG
GGCCAGGTGTCTGAGGAGGTCCTGGACGCACTTATTGACCGAAAAATGGCGCCAGTGACC
ACTCACGATGAGAAAATGATGCAGCTATACTGGTCCGAAAGCGGAGAGGGCTTTCAGTGG
GTGGAGCCGGAGCAGGACCCCGCCGAGATTCTCTGGAGACGTCATCTGAGAGAACGTGAG
ATTCAGAAGCTCAAGTAGACGTTCCAGACCCAAATGGACTTTACCAGTGCTCTATGGATG
GAGAATGCAACTCCAAAGACTCGGATACAGTGCACTAGGCCCACAAGCTACCAAGGATGT
ATATAGATTATTGATTTTCAACCT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F12507g_CDS-001

Protein length: 326 aa.
Product: Conserved hypothetical protein

>YALI0F12507g_CDS-001 MLSRRLFSTTAALRVPFSGPLDIGAITAYSAKLTPSSSTEDVVSALHAANKLEHTYAASG
LTTQVHEVRELIDKVLDLPEKPSLDMLQKTVCTSKYYSPWFGTRAMEVWQQKNPDTPIPR
TVAMGPLRKALWETDFPAAFKVVDLSAGSPQHIKSIKQKMLKYLGVWGLFGLSISGAGKG
LMAADLLFGVAPATFHILWWAYFANVSIFSVISTAGRFCGNGEVVKWMQGTFYSHYFTHA
DEMKMVSRIVEIDRLMPENQGQVSEEVLDALIDRKMAPVTTHDEKMMQLYWSESGEGFQW
VEPEQDPAEILWRRHLREREIQKLK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG