YALI0F12463g

Overview

Description similar to uniprot|P33416 Saccharomyces cerevisiae YDR258C HSP78 Oligomeric mitochondrial matrix chaperone
Locus type CDS
Locus tag YALI0F12463g

Location

Species Yarrowia lipolytica Positions 1665482..1667933
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 2452 (nuc.)
Previous locus YALI0F12419r Next locus YALI0F12485r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F12463g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F12463gYALI0F12463g_mRNA-001YALI0F12463g_CDS-001

Nucleotide sequence

 

>YALI0F12463g
ATGTTTCGAGTGAACGCAAAGAACGTGCAGCGATTGAGGGCGCGACCTCTCGCTCACGCC
AGCACAAGGACCCAGGTCCAGACCAGAGCTTTGAGTACTGCTGTTCGACCTACGACCTCC
GCTACTACCAGCTGCTCTACATGGGGCACCATCAGAACCCCGACGATGATTCGGGCTCCA
GGAAGCCTCGGATCGCCGAGATTCATCACTATGACCCAGAACCCCGGTGGCGAAAAGTCG
TACCTGGAGTCGTACGGAGTGGATCTGTGCGAAAAGGCCAAGGAGGGCAAGCTAGATCCG
GTGATTGGTCGAGACGAGGAGATCAAGCGAACGATCCAGATTCTGTCTCGACGAACGAAA
AACAACCCCGCGCTGATTGGTCTGGCCGGAACCGGTAAGACCGCCATCATGGAGGGTCTG
GCCCAGCGAATCGTCAACGGCGAGGTGCCCGAGTCCATGAAGGGCAAGCGGGTGATAGCT
CTGGACGTGGGGGGACTCATTTCCGGCGCCAAGTACCGGGGCGAGTTCGAGGAACGTCTC
AAGGGCATTCTGGAGGAGATTGACAAGGCTGAGGGCGAGGTGATTCTCTTTGTCGACGAG
TTGCATCTGCTGCTGGGCCTAGGAAAGGGCGAGGGCTCGGTTGACGCCTCCAACCTGCTC
AAGCCCGCTCTGTCGCGAGGTAAGCTGCAGTGCTGTGGAGCCACCACCATTGACGAGTAC
CGAAAGTACATTGAGAAGGATGCGGCCCTGGCTCGACGATTCCAGTCGGTCATGGTCAAC
GAGCCCTCCGTGGAAGACGCCATTTCCATTCTGCGAGGTCTCAAGGAGCGGTACGAGGTG
CACCACGGAGTGCGACTGACCGACGCTGCTCTGGTGACTGCCGCCGTCTACTCCAACCGG
TACATTTCCGACCGGTTCCTCCCCGACAAGGCCATTGATCTGGTTGACGAGGCTTGTTCG
GCCCTGCGACTTCAGCACGAGTCCAAGCCCGACGAGCTGCAGGAGCTGGAGCGCCAGACG
GTGACTCTGGAGATTGAGCTGGAGTCGCTGCGAGAGGAGGAGGACCCTCTGTCGGTGGAG
CGACGAAAGAAGGTGGAGGAGAAGCTCGAATTCAAGAAGGGCGAGATTGAGCGGCTCACC
AAGGTGTGGGAGGACGAAAAGCGGGCCATTGACCAGATCAAGGAGACCCAAAAGACCCTT
GATGGCGCCCGAACCGATCTCGACACCGCCAGACGAACCGGCGACTTTGCCGCCGCCTCC
AAGATCCAGTACCAGGACATTCCCGAGCTGGAGCGGATTCTCAAGGACGCCGAGTCCTCC
GACGCCGGCTCTTCGTCTCTTTTGCACGACTCTGTGACCCCCAATGACATTGCCAAGGTT
GTTTCTCGAATGACCGGCATCCCTACATCGTCCATGATGAAGGGCGAGAAGGACAAGCTG
CTAGATATGGAGGTGTGCATGAAGTCACGTGTTGTGGGCCAGGACGAGGCCGTGGACGCT
GTGGCTGACGCAGTGCGACTCCACCGAGCCGGTCTCACCAACCAGAAGCGTCCAGTAGCC
TCGTTCATCTTCCTGGGACCCACCGGTACCGGTAAGACCGAGCTGACCAAGGGTCTGGCC
GAGTTTCTGTTTGACGACGAGAATGCCATCATTCGGTTCGATATGTCCGAGTTCCAGGAG
CGACACTCCATTGCTCGACTCATTGGTTCTCCCCCCGGCTACGTTGGCTACGAAGAGTCT
GGAGAGCTGACCGAAAAGGTGCGACGAAAGCCCTACGCCGTGGTTCTGTTTGACGAGTTT
GAGAAGGCCCACCCTGATGTGTCCAAGCTGCTGTTGCAGGTGCTGGATGAGGGTACGCTG
ACCGACTCGCAGGGCCGAAAGGTGGACTTTACCAACACCATTCTGGTCATGACCTCCAAC
ATTGGCCAGGAGTATCTGATTTCGGACTCTCCCGACTCCAAGAAGAAGGTGATTGAGGCG
CTCAAGTCGCACTACGCCCCCGAGTTCATCAACCGAATCGACGAGACTCTGGTGTTCAAC
CGACTGACCAAGGAGGCGCTGACCGAGATTATCGACATCCGGCTGCTCGAGGTCCAGGCT
CGACTCGAGGACAAGCGAATCACGCTCTTTGTCGACGACGAGGCCAAGCAGTTCCTCGTC
GACCACGGCTACGACCCCATGTACGGCGCCCGACCTCTCAACCGACTCATCCAGAAGAAG
GTGCTCAACCCACTGGCTCTCCATCTGATCCAGGGCCGAACCCGAACCGGCGAGAATGTG
CACGTGACTGTTAAGGACGGCGACATTTACGTTCCTGCCAACCACGAGACTGGAGAGATT
GAGGAGTGAACCAACCTAGCGTCAAGCTGCATGTCTGGTAGACAGAGGTCATCAGATGAA
GGTAGACTACACTAATGTATATAGAATAATGTTACTGATTGATAAGTTGAGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F12463g_CDS-001

Protein length: 783 aa.
Product: Oligomeric mitochondrial matrix chaperone, putative

>YALI0F12463g_CDS-001 MFRVNAKNVQRLRARPLAHASTRTQVQTRALSTAVRPTTSATTSCSTWGTIRTPTMIRAP
GSLGSPRFITMTQNPGGEKSYLESYGVDLCEKAKEGKLDPVIGRDEEIKRTIQILSRRTK
NNPALIGLAGTGKTAIMEGLAQRIVNGEVPESMKGKRVIALDVGGLISGAKYRGEFEERL
KGILEEIDKAEGEVILFVDELHLLLGLGKGEGSVDASNLLKPALSRGKLQCCGATTIDEY
RKYIEKDAALARRFQSVMVNEPSVEDAISILRGLKERYEVHHGVRLTDAALVTAAVYSNR
YISDRFLPDKAIDLVDEACSALRLQHESKPDELQELERQTVTLEIELESLREEEDPLSVE
RRKKVEEKLEFKKGEIERLTKVWEDEKRAIDQIKETQKTLDGARTDLDTARRTGDFAAAS
KIQYQDIPELERILKDAESSDAGSSSLLHDSVTPNDIAKVVSRMTGIPTSSMMKGEKDKL
LDMEVCMKSRVVGQDEAVDAVADAVRLHRAGLTNQKRPVASFIFLGPTGTGKTELTKGLA
EFLFDDENAIIRFDMSEFQERHSIARLIGSPPGYVGYEESGELTEKVRRKPYAVVLFDEF
EKAHPDVSKLLLQVLDEGTLTDSQGRKVDFTNTILVMTSNIGQEYLISDSPDSKKKVIEA
LKSHYAPEFINRIDETLVFNRLTKEALTEIIDIRLLEVQARLEDKRITLFVDDEAKQFLV
DHGYDPMYGARPLNRLIQKKVLNPLALHLIQGRTRTGENVHVTVKDGDIYVPANHETGEI
EE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG