YALI0F12331g

Overview

Description weakly similar to uniprot|P40169 Saccharomyces cerevisiae YNL194C (ohnolog of YDL222C); weakly similar to uniprot|P40169 Saccharomyces cerevisiae YNL194C (ohnolog of YDL222C)
Locus type CDS
Locus tag YALI0F12331g

Location

Species Yarrowia lipolytica Positions 1647760..1649029
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1270 (nuc.)
Previous locus YALI0F12320r Next locus YALI0F12364r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F12331g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F12331gYALI0F12331g_mRNA-001YALI0F12331g_CDS-001YALI0F12331g_mRNA-002YALI0F12331g_CDS-002

Nucleotide sequence

 

>YALI0F12331g
ATGGTTCTCCGACCCCTGATTGGCGCCTTCACCATCCTGCTGATTGCAGGAGCCACCCTG
CTGTCCTTCTTCGTGCTGCTTGCCGGCGCGCGAGACTCGGCCCCCCTCAACAACTTCTAC
TGGTTGGAGGCGGAAACCTCCAACATCCCCGGGGCTCACGACTTCACCCGATGGACCACC
TACAACTTCTGCGGCGTGTCCACTGACAACAAGAACTTCGAGTGCTCCAAGAACCAGGCC
GACTTCCCTTTTGACCCCGTGCGAAACTTTGGCACCGAAGAGGGCATCCCCCAGGAGTTC
ATTGGCACCCACAAGTGGTACTACCTGACCCGGTTCGCCTTCCCCTTCTACCTGATTTCT
CTCTTCTTCACTGTCATCACTCTGTTTGTGTCGCTCTTTTCGCTGTGCTCGCGTCTGGGC
TCCGCACTGGCCATCTCCGCCAACGCCATCTCCGTCTTCTTCTGGACCATTGCCGCCTCC
CTGTCCACCGCCTGCTACTCCCAGGCCAAGGGCAAGTTCGACCAGGCCCACCTGGGCACC
AAGATGTTTGCCTTCATCTGGACCACCGAGTTCATTCTGCTGCTCACCCTCTTTTTCTTT
GGGTTTGCCTGCTGCTCCCGAAAGCAGTCCTCTAAGGTGAGTTACTAACTGCTTTGCCCA
ATCTCCCCCCTCGCGTGGAGAATCGCGCTGGCCTTGTGATAGTCTTACTAACCAAAGGTC
GAGTCGTACTCTGAGAAACAACCCCGTGCTAACAAATTCTTTAGAACTTCGCGTAAGTCC
AAATCCACTGGAGTCACGTCGGCCGCATAATGTACAATAGAGCGACACCAAAACACAACT
CAGACACACACACATATCGACCCCTTCGACCCCTTGTGAGTCTTTGATGCGCAGCGATCG
CAAAACAAACAAGATGACGACGAAACATGCAGCCTTGTCGATCTAGGCGATGATGAAGAC
AATGGCAAAGACGACGATGATTACAACTGCGACAACAACAGCACGGTCACAATTCCCGTG
TTAACCCCCATTCCCTTTCATTACAAGACAACACAATTGGTGCTAAAACTTTCCCAACCC
CCCCCCCACCTAAAATCCCCTCTACGATTCTTCTTTTCTAATTTCTCGACATGGATACTA
ATACCCGGCTCTAGTCTTGTTTCTTCTGCTTCTTGGACCACCCCTTTTGAAAACATGTCA
CCTCAGTTTAATTTCTTACAGCACCCAATTGTCACCTTGTATTTTAATTTTATTCATACA
CTCATGTTTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F12331g_CDS-001

Protein length: 216 aa.
Product: Conserved hypothetical protein

>YALI0F12331g_CDS-001 MVLRPLIGAFTILLIAGATLLSFFVLLAGARDSAPLNNFYWLEAETSNIPGAHDFTRWTT
YNFCGVSTDNKNFECSKNQADFPFDPVRNFGTEEGIPQEFIGTHKWYYLTRFAFPFYLIS
LFFTVITLFVSLFSLCSRLGSALAISANAISVFFWTIAASLSTACYSQAKGKFDQAHLGT
KMFAFIWTTEFILLLTLFFFGFACCSRKQSSKNFA*

YALI0F12331g_CDS-002

Protein length: 243 aa.
Product: Conserved hypothetical protein

>YALI0F12331g_CDS-002 MVLRPLIGAFTILLIAGATLLSFFVLLAGARDSAPLNNFYWLEAETSNIPGAHDFTRWTT
YNFCGVSTDNKNFECSKNQADFPFDPVRNFGTEEGIPQEFIGTHKWYYLTRFAFPFYLIS
LFFTVITLFVSLFSLCSRLGSALAISANAISVFFWTIAASLSTACYSQAKGKFDQAHLGT
KMFAFIWTTEFILLLTLFFFGFACCSRKQSSKVESYSEKQPRANKFFRTSRKSKSTGVTS
AA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG