YALI0F12111g

Overview

Description similar to uniprot|P40564 Saccharomyces cerevisiae YIR004w
Locus type CDS
Locus tag YALI0F12111g

Location

Species Yarrowia lipolytica Positions 1597147..1598803
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1657 (nuc.)
Previous locus YALI0F12089g Next locus YALI0F12133g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F12111g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F12111gYALI0F12111g_mRNA-001YALI0F12111g_CDS-001

Nucleotide sequence

 

>YALI0F12111g
ATGAAGGTGGCAGACACAGCCTACTACGACCTGCTGGAGGTGCAGGTGGACGCCTCGGAC
GCGGAAATCAAAAAGGCGTACCGAAAAATGGCGATTCGACACCATCCCGACAAGAACCCC
GACGACCCGACCGCCAACGAGCGATTTCAGGCGATTGGCGAGGCGTACCAGGTGCTGTCG
GACAAGGACCTACGACAGCAGTACAACGAGCACGGCAAGGACTACGCGGTGCCGGCCGAG
GGCTTTGCGGACCCGGCCGAGTTCTTCACGATGATTTTCGGAGGCCAGCTGTTCAACGAC
TGGATTGGCGAGCTGTCTCTGCTCAAGGACATACAGAAGAGCATGGAGATGCAGGAGGAG
GCCGAGACCGAGGAGGGAGCCGAGGGAGCCGGTGCTGGTGCTGGTGCTGGTGCTGGAGGC
GCGGCTGCTGGAGGCGCGGCTGCAGGGGCTTCTGCAAGTCCCGGCGGAGTCAACCACTCC
ACTGCGTCGCTGACAGAGCATGCTCACGAGGACAAGACCGGCCCCGTCCATCCTCCCGGA
TCTGCGGCGGAGGCGCTGGCTCGAGAAAAGGAGCTGCGAAAGAAGAGACGGGCCCAGACC
GAGGCTGCTCGGGCCAAGCGGCTCGAGTTCGAAAAGGAGCGTCAGGAGGCCCGAAAGGAG
CGAATCAAGATGCTTGAGAAGAAGCTCATTGAGCGAATGTCCGTGTGGACCGAGACCGAC
AAGACCGACGACCTCACCCGGTCTTTCCAGGAGAAGATCCGTCTGGAGGCCAACGAGCTC
AAGATGGAGTCCTTTGGCGTGGAGCTCGTACACGCCATTGGCCAGGTCTACCTGACCAAG
GGATCCATGTACCTCAAGTCGCAGAAGCTGTTTGGATTCATCCCCGGCTTCTTTGGCAAG
CTCAGAGAGAAGGGTACTTCTGCCAAGGAGACCTGGAACACCATTTCGGCCGCCATCGAG
GTCCAGGGTACCGCCAAGGAGATGGCTGCTGCCGAGGAGGCCGGTGGAGACGACTGGACC
GACGAGACCAAGGCCGCCATGGAGCGTCTGCTGATCGGAAAGACCCTGGCGGTCGCATGG
AGCGGCGCCAAGGGAGAGGTGCTTGACGTGCTCCGGGAGGTGTGTGAGAACATTCTCTAC
GACAAGAAGGTGCCTCAGGCCAAGCGCCAGGAGCGTGCCCAGGCCCTGGTGCTCATGGGC
TCCATTCTCAAGCAGACGGAGCGATCCAAGGCCGAGCAGGAGGAGGTCAAGGTGTTTGAG
GAACTCATGGCCGAGGCGCAGGTCAAGAAGGCCAAGAAGCGGGAGCGAAAGCACGGCATT
CATATTCCCATCATTGGCCACAGACGAGAGGGCAGTGGGGTCAGCCAGACTGCTGGAGCC
ACTCCGGGCTCTCCAGGTGTGCATGTGACTCCGGAGAAGGCCACCGCTTAGGATGAGGTA
GGGGACGCTAACATGGACCAGGAGGAGAACAAGCCATCCGCTGCCAGGTGGTATTTGGAT
GGGCTGTGGTGAGGTAGTTTTGGTAATACTGATGTGTTTAATGGCAATCATCTTGTAGAT
GGCAACCATGTTGTAGACTCGATTGAAATTGTAGAGGATGAATCTCGTGGGAATCGTCGA
CGTCAGGGTCACGTGTCATCCTCTCACTTGAGCGCTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F12111g_CDS-001

Protein length: 477 aa.
Product: Cytosolic J-domain-containing protein, putative

>YALI0F12111g_CDS-001 MKVADTAYYDLLEVQVDASDAEIKKAYRKMAIRHHPDKNPDDPTANERFQAIGEAYQVLS
DKDLRQQYNEHGKDYAVPAEGFADPAEFFTMIFGGQLFNDWIGELSLLKDIQKSMEMQEE
AETEEGAEGAGAGAGAGAGGAAAGGAAAGASASPGGVNHSTASLTEHAHEDKTGPVHPPG
SAAEALAREKELRKKRRAQTEAARAKRLEFEKERQEARKERIKMLEKKLIERMSVWTETD
KTDDLTRSFQEKIRLEANELKMESFGVELVHAIGQVYLTKGSMYLKSQKLFGFIPGFFGK
LREKGTSAKETWNTISAAIEVQGTAKEMAAAEEAGGDDWTDETKAAMERLLIGKTLAVAW
SGAKGEVLDVLREVCENILYDKKVPQAKRQERAQALVLMGSILKQTERSKAEQEEVKVFE
ELMAEAQVKKAKKRERKHGIHIPIIGHRREGSGVSQTAGATPGSPGVHVTPEKATA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG