YALI0F12023g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0F12023g

Location

Species Yarrowia lipolytica Positions 1586330..1587682
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1353 (nuc.)
Previous locus YALI0F12001g Next locus YALI0F12045g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F12023g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F12023gYALI0F12023g_mRNA-001YALI0F12023g_CDS-001

Nucleotide sequence

 

>YALI0F12023g
ATGAACAGAGAGGCGCGAGAGGCCCGAATGCGGGGCGCGGGGTGAGTTTCACACACGAGA
ATACGCTCTGTTCCGCTTACTAACACAGAACGCGAAAAGTTGCGCCCGTGAAGCTCGTGA
TTCATGGAACTACGCCAGGCAGTGGATCTAGTGCTACGGGAGGATTCCGAGAACAACAAA
AGGAGGCCCAGACACCTACTCCGTTTGAGCGCAATCAGAGGAGGCGTCAGACGGATGTCT
TACCCATGGTTGGCGAGGTGGAAGACATACGAGATGGAGAGGGAGATTTGGCTGGAACAG
TTCAAACGGAACCAGCGATACCGTACACTCTGCCGGTGCGACCAGTGTCTACTTCGCCAC
CGGAATTCAATCTCACTCAAGACTTTGAAGAATCACCGCCTGGACCCGAAGCTGTTGACG
AAGATGCAGTTGATCTGAGTGTTCAACATCACGAGCAGTTTGACGTGAGCGATTCCGACG
AGGAGTTTGTGCCTGCAGTGGTTTCTGACGTGGAACTGGAGCACCCGCGTCCACCCAGTC
CTCCTCGACAATCTCAGGCCACCAGAGGCAACTACGCGGACCGAATCAAAACATTCACTG
CTGAAGAGGCCCCGGAGGAGACTCCGGCGTCGTCCAGAAACAGAAGCAGCGTGAGACCGC
CCAGAAAGAAGAGAAACAAGGGAATTGCGCTGGAGGTGACGCAACTTGACACGGACGAGC
CGGAATTCTCTCCCCGAGTCACCATGGTGGACTTTGTCAGTCAAATGGTTCTGGAGACGC
TGGACCAGGAGCTGGGCAAAGACGTGGACGAGGAGCAACGAGAGGTGATTGAAAAGTACA
AGGCCGAGCTCAATAGCAGGTTCCTGGAGCTCTGTGATATCAACAATGCAGTGTACATGC
AACGGGCTCGTGTGGCCAAGCTGATCCGGACGAAAAACACCGCCCAGGAAGCTCTACTCA
AGGTGAACGAGAATCTCAATGGTGCGCGGGTGGAGACTGATCGAAAGAGTCGTGAATACG
CCGCCAAAAAACGTACCTGGGACGATACTCGGCTTGTCAACGAGTTTTTGCATGATGTGC
AAGACGTCAACAACAGTCTGCGAGGAGTGCACTCTTCTGGCGTGATAATGACGCCTTCCG
TGTTTGATAAGCTAGCTCATATCGAGGAACAGACCCAGTTATTGGGTAAACTCCGTCAAC
TCAATGGACTGTTGGAGTTTGCCAGTCAGAAGCTGTCCTCCTAGAACCCCTCACCGTACG
CTACAGTTGGATATTTATTAGTTCTTTTATTTTGATACTTTCATACATGGGCGTGGCCTC
ATGTGGTTACAAAAATGCATTACCTGTCGTAGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F12023g_CDS-001

Protein length: 399 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0F12023g_CDS-001 MNREAREARMRGAGTRKVAPVKLVIHGTTPGSGSSATGGFREQQKEAQTPTPFERNQRRR
QTDVLPMVGEVEDIRDGEGDLAGTVQTEPAIPYTLPVRPVSTSPPEFNLTQDFEESPPGP
EAVDEDAVDLSVQHHEQFDVSDSDEEFVPAVVSDVELEHPRPPSPPRQSQATRGNYADRI
KTFTAEEAPEETPASSRNRSSVRPPRKKRNKGIALEVTQLDTDEPEFSPRVTMVDFVSQM
VLETLDQELGKDVDEEQREVIEKYKAELNSRFLELCDINNAVYMQRARVAKLIRTKNTAQ
EALLKVNENLNGARVETDRKSREYAAKKRTWDDTRLVNEFLHDVQDVNNSLRGVHSSGVI
MTPSVFDKLAHIEEQTQLLGKLRQLNGLLEFASQKLSS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG