YALI0F12001g

Overview

Description similar to uniprot|P53173 Saccharomyces cerevisiae YGL054C (ohnolog of YBR210W) ERV14 ER-derived Vesicles
Locus type CDS
Locus tag YALI0F12001g

Location

Species Yarrowia lipolytica Positions 1585707..1586411
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 705 (nuc.)
Previous locus YALI0F11979g Next locus YALI0F12023g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F12001g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F12001gYALI0F12001g_mRNA-001YALI0F12001g_CDS-001

Nucleotide sequence

 

>YALI0F12001g
ATGGCCGCCGACGCGTACACCTTCATCTTCGCCATCCTCATCTCGCTAGTGAACCTCTTT
CTGCAGGTTTTCTTCACAATCATGTACTCGGACCTGGAGTGTGATTACATCAACCCGATC
GACCTGTGTAATCGGCTCAACAACTACGTGTTGCCCGAGGCCGCGGCGCACGCCGCCCTG
ACCATTGTGTTCCTGCTCACGGGCCATTGGATCGTGCTGCTGCTCAATGCGCCCATCTTT
GCGTACAACGCCCACAAGATTTATACAAACACCCATCTCCTGGACGCCACCGAGATTTTC
CGAACGCTCAAGAAACACAAGCAGGAGTCGTTCATCAAGCTCGCCTGCTACCTTGTCTTT
TTCTTCCTCTATCTTTACTGCATGATTGCTGCTTTGGTGAGAGAGGACTAAGCACCACCA
TCATGAGGGAAGAGTGAGGAAATGAGACACTTGGGCGCTATCAATGGTGACCGACTAAGA
GCTCTACAGTTTGCACCTGTGTCAATCAAGAAGAGGGTCCGATTGATACATTGGAAACGA
CGAGCAACAGCTCTTGGATGGAGGCTCAATACTACCAGTACTGTCATGGTACAATCAGTT
GCCTCCATGGATAAGGACAAAAGCCTACGACAGGTAATGCATTTTTGTAACCACATGAGG
CCACGCCCATGTATGAAAGTATCAAAATAAAAGAACTAATAAATA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F12001g_CDS-001

Protein length: 137 aa.
Product: COPII-coated vesicle protein, putative

>YALI0F12001g_CDS-001 MAADAYTFIFAILISLVNLFLQVFFTIMYSDLECDYINPIDLCNRLNNYVLPEAAAHAAL
TIVFLLTGHWIVLLLNAPIFAYNAHKIYTNTHLLDATEIFRTLKKHKQESFIKLACYLVF
FFLYLYCMIAALVRED*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG