YALI0F11979g

Overview

Description some similarities with uniprot|G3AN35 Spathaspora passalidarum hypothetical protein SPAPADRAFT_61516
Locus type CDS
Locus tag YALI0F11979g

Location

Species Yarrowia lipolytica Positions 1580904..1582499
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1596 (nuc.)
Previous locus YALI0F11957g Next locus YALI0F12001g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F11979g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F11979gYALI0F11979g_mRNA-001YALI0F11979g_CDS-001

Nucleotide sequence

 

>YALI0F11979g
ATGAACCCCAACGACAAATACACAGACGACACGCTCAACGAGCTGCACTTTTCGCAGACG
GTGGGCTCGCCCGAGTACGGCTCGCTGCTATCGCGCCAAGTGCTGCAGGGCGGAATCAAC
TACGACGACCTGGAACAGATGGGAACAGTGCCGGACGACCTACTGGACCTAGACGACATG
TCGCCGGAGTCGTCCAACCGCGGCCAGTACATTCCGCAGACCGGTAACAGCTCCAACAAC
ATGTATCCGCCAGAGACACAGCTGCAATACGGCATCACGCCGCCCATTCCCGAGTCCTCC
AGCCCGTTTGACGAGTATATGATTGGACGCTATGTCAACAACATGGACGGTATCCAGCTG
CCTTCCCAGATGAGGCCAAATACCAATTCCAACACAGGCAGCAATACCAGCAACAACAAC
AATCTGAATGTGAACAACAACAACAACAACAATCTCAATGTCAACAACAACAACAACAAC
AACAATAACAGCAACGATGTCAGTATGGGCAACAGCAACAACAACACTAATTTGACCGAC
AGTCCACAGCTTAACGCGTCGTATTACCCCACTTCCGCGTCCCACTCCCGCAACTCGTCC
GCGGGAATCTCCAATATGGGCATGGTCCCCGTGCAACAGCAGCAGATGGGCTCGTCGCTG
TCCCCCGACACTACGCCCTACGGCTCGCCCACCAACATCCCCGTACCCACGTCCTCGGGA
GCGTCACGTCGCCAGGTCAATTTTGCCGACCAGTTTGGCTCGCCGTCGTCGTACGGTTCG
TCGCTCGAGCACCGCGCGCTCTCTCCTTACGCGCGCTCGCCGCTGTCCAAGGGCGTCATT
TCGAGGTCGCTGGACGAGAAGCAGCAGCAGTTGCTTGCGGCGGCAGAGCGCAAGCGTAAG
CGGCGCGAGTCCCATAACGCCGTCGAGCGCCGACGACGCGACAACATCAACGACCGCATC
CAGGAGCTGTCGACACTCATTCCCGAAAACTTTCTCAACGAGCCAATAATCGGCGGGTCT
CCGTCGCTGGGTCCTATGGGCTCGCCACCGCCGTCGCAGACCCCTGGGACCAAAGATGGA
CGTCCTAATAAGGGCACCATTCTGATCAAGAGTGTTGAGTACATCAAGAAGCTGCAGACG
GTCATCGACGAGCAGAATCAGCGGGAAATCGACATGTATGAGCGGCTCAACATTCTGGAG
CGGCAGCTAGGCATTCCCGAGACCAAGCTGGAGACGTCGTCGGCAGAGCTGGCTCTGGCC
AGATTGGGGATTAAGGATGACCTATCGCCGGACCAGGTGGTGGTCAAGCAGGAGGAAGAG
TATTAGACGTACAACTAGTGTATTAGATAAGTTATTGATCGAGCAGCTAACTGCCGCGGC
TGTAGTGGGCGTTGGATGGGATGGGATTTGGAATTTGGGATTACAATGTGACTTCACTGG
TTGCATTTGATGATTTCTTTTTCTGGTCCGGACCTGTCTATTAGTGCGGATTTGGAGGGC
ATGAGTGATTATAGCTTCCAAGAGTGGTGTGGTTATATCACCGCAGGCAAACGCTACCAG
GAGTTGGGGTAATAGCGATGGCGAAAACGGGGAGGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F11979g_CDS-001

Protein length: 442 aa.
Product: Conserved hypothetical protein

>YALI0F11979g_CDS-001 MNPNDKYTDDTLNELHFSQTVGSPEYGSLLSRQVLQGGINYDDLEQMGTVPDDLLDLDDM
SPESSNRGQYIPQTGNSSNNMYPPETQLQYGITPPIPESSSPFDEYMIGRYVNNMDGIQL
PSQMRPNTNSNTGSNTSNNNNLNVNNNNNNNLNVNNNNNNNNNSNDVSMGNSNNNTNLTD
SPQLNASYYPTSASHSRNSSAGISNMGMVPVQQQQMGSSLSPDTTPYGSPTNIPVPTSSG
ASRRQVNFADQFGSPSSYGSSLEHRALSPYARSPLSKGVISRSLDEKQQQLLAAAERKRK
RRESHNAVERRRRDNINDRIQELSTLIPENFLNEPIIGGSPSLGPMGSPPPSQTPGTKDG
RPNKGTILIKSVEYIKKLQTVIDEQNQREIDMYERLNILERQLGIPETKLETSSAELALA
RLGIKDDLSPDQVVVKQEEEY*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG