YALI0F11935g

Overview

Description weakly similar to uniprot|P40857 Saccharomyces cerevisiae YJL097w PHS1 Essential 3-hydroxyacyl-CoA dehydratase of the ER membrane, involved in elongation of very long-chain fatty acids
Locus type CDS
Locus tag YALI0F11935g

Location

Species Yarrowia lipolytica Positions 1577886..1578567
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 682 (nuc.)
Previous locus YALI0F11913g Next locus YALI0F11957g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F11935g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F11935gYALI0F11935g_mRNA-001YALI0F11935g_CDS-001

Nucleotide sequence

 

>YALI0F11935g
ATGGCATCGGCTCTGGTAACCAAGTACCTCACGCTGTACAACAGCATTTCGACCTTTCTG
TGGTTTGCCGTTCTGGCACGGCTTCTGATTCTGCTGCCTCTGGTGGGATACGATTACGTG
TCTGGGGGTCTGCGGGACTTCCTCATTGGAGTCCAGACTCTGGCAGGCCTGGAGATCTTC
CACTCGCTGTTCGGCCTGGTGCGATCGCCCCTGCAGACCACCGTGATGCAAATCTTCTCG
CGATTTGCCCTCGTGTGGGGCGTGCTGTACCAGTACCCCCAGACCGGCACTGACATCTTC
TTCACCTTCATGGTGATTGCGTGGTCCGTGACCGAGGTGATCCGATACTCCTTCTACGCG
CTTAACCTAGCTGGCTGGGGCGTCCCCGACTGGCACCAGTGGATCCGATACAACTTCTTC
CTGGTGCTGTACCCTCTGGGTGTGTCTGGCGAGATGAAGCTCATGTGGAACGCCATTGCC
TACGCCCGAACCGAGCAGCCCTACTTTGCTCTCTTCCTCAAGGCCGCCATGGTCATCTGG
CCCATTGGACTCTACATTCTCTATTCCCACATGCTCAAGCAGCGATCCAAGCATTACCGA
CAGGTTATCAAGAAGGACAGATAAGCTGAGATGGACTAGTGTGATTGGATATAGTCTGAT
ATATTCTTCCTCTGCAAGTTGC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F11935g_CDS-001

Protein length: 208 aa.
Product: Conserved hypothetical protein

>YALI0F11935g_CDS-001 MASALVTKYLTLYNSISTFLWFAVLARLLILLPLVGYDYVSGGLRDFLIGVQTLAGLEIF
HSLFGLVRSPLQTTVMQIFSRFALVWGVLYQYPQTGTDIFFTFMVIAWSVTEVIRYSFYA
LNLAGWGVPDWHQWIRYNFFLVLYPLGVSGEMKLMWNAIAYARTEQPYFALFLKAAMVIW
PIGLYILYSHMLKQRSKHYRQVIKKDR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG