YALI0F11803g - PRC1

Overview

Description uniprot|Q6C209 Yarrowia lipolytica YALI0F11803g PRC1 Ester hydrolase, serine carboxypeptidase 3 homolog
Locus type CDS
Gene name PRC1
Locus tag YALI0F11803g

Location

Species Yarrowia lipolytica Positions 1556704..1558637
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1934 (nuc.)
Previous locus YALI0F11781g Next locus YALI0F11825g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F11803g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F11803gYALI0F11803g_mRNA-001YALI0F11803g_CDS-001

Nucleotide sequence

 

>YALI0F11803g
ATGAAAACCGCAGCCATTCTCTCCTGTCTCGGTCTGGTGGTCGCCTCGGCCATTCCGGAC
TTCACCACGTCGTCCCAGTTCCCCACAAAACGACTGTCTGCCCGATCGGTGCCCGGAGAC
CTCGGTCTGGACGATGTCCAGCAATACACCGGCTATCTGACCGCCAATGAGACCGGCGAA
CACTTTTTCTACTGGACCGTCGAGTCACGTAACGACCCGTCCAAAGACCCCGTCATTCTG
TGGCTCCAGGGAGGCCCCGGATGCTCCTCAATGACGGGCTTGCTGTACGAGAACGGACCG
TCGTTCATCGATAATGCCACCCTCACGCCCATCCACAACCCCCATTCGTGGAACAACAAC
GCCACCGTCGTCTATCTGGACCAGCCAGTGGACTCGGGCTTCTCCTGGGGCCAGACCAAC
AACACCGACACCTCGGCCAAGGGCGCCAAGGAGGTGTATGCGTTCCTCGAGCTCTTTTTC
CAGCGATTCCCCCAGTATCCCAAGACTCTCCACGTTGCCGGCGAGTCCTACGCGGGCCAC
TACATTCCCTCTGTGGGCGCTGAGATTCTACGTCACCCAGAACGGTCTTTTGACCTCAAG
TCTGTCGTCATTGGTAACGGACTGGTCGACGTGTTGCAACAGTACAAGGAATACCAACCA
ATGTTCTGCGGCGGCGGCGGAGTGCCCGCGGTCGTCGGTCCCGAGGTCTGTGATCATCTG
GACGACACTCTGGCCGCCTGCAACAAGCTGGTGGAAACTTGCTACAACAACGTCACCAGC
GCCAACTGCGTGCCTGTGGGCGGCGAGCTCTGCTCAAACCTGACTCTGCCGTTTTACAAC
GAGACCCTCAACATCAATCCCTACGACATTACCAAAAAGTGCGAGCCTGCGCTGGACAAT
GGCTGCTACAACGAATCGGACGGCATGACGCGATGGCTCGAGCTTCCGCGGGTGCTGACC
GCCATTGGAGCCGAACATGCCTGGAACGGATGCTCCGACAATGTGTCCGACCTCTTTTAC
TCCACCGGAGACCCCTTCCGACCCGCCCAGCGAGATGTGACGTTTATGTTGCAGCACGGG
CTCCCGGTGCTTATCTACGCCGGAGCCCACGACATTATCTGTAACTGGCTGGGCCAGCGG
GCCTGGACTGACGCTCTTCCGTGGCACGGACACTTCAAGTTCCGACTCAAAAAGCTCCGG
CCCTGGCATGTGGATGGCAAGGTCGCGGGAGCGGTCAAGAGTCACGCGGGATTCACGTTT
CTGCGGATCGAAGACGCGGGTCATATGGTTCCTCATGATCAGCCCAAGCCGGCTTTGGAG
ATGATTAATCGGTGGATTAGTGGTGATTATTGGTTGGTTGGAGAGAAGCATTAATACGAG
GGGTTGTAACTCTGAGCCGGTGTGGTTTGTACTTACTACGAACTCCTGACTCGAGTTGTG
GGGTTTGAGAGCGTTTCAGCTTAACCACAAACTGCTTACTCACCACTCGCCAAATTGCTT
ACCCACCACTCGCCAATTGCTTACTCACCACCTGCCAATTGCTTACTCACCAACTACCGA
TTACTCACTCACCGACTACCAATTGCTTACTCACCACTCGCACCACCAACCACCAACTAC
TCCTTTCTATTCTCTTCTGTCAACCATCCTGGAGATGGACTTTGAACACGTTCAAATATT
TACTTATTCTACTTTTCTATACTTCTCTACACTTCTACACTTTTTCGCTTCCTGAAGTAC
TTACTAATAAGTATTTGACCCTTTACTACGGAATGAAAATGACAAAGTACCTGTCTAGAC
CAGTGCTTGGTGACTGTATTTACAACTAATGTACTCACAACTGATTGTGTTCACAACTGA
TTGTGTGCCTGTCTATTACGAGTTGTAATGGTCCTTCAGCATAGAGGTCAAGTGTTTGTT
AAAAGATGAAATGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F11803g_CDS-001

Protein length: 458 aa.
Product: Ester hydrolase, serine carboxypeptidase 3 homolog
Gene: PRC1

>YALI0F11803g_CDS-001 MKTAAILSCLGLVVASAIPDFTTSSQFPTKRLSARSVPGDLGLDDVQQYTGYLTANETGE
HFFYWTVESRNDPSKDPVILWLQGGPGCSSMTGLLYENGPSFIDNATLTPIHNPHSWNNN
ATVVYLDQPVDSGFSWGQTNNTDTSAKGAKEVYAFLELFFQRFPQYPKTLHVAGESYAGH
YIPSVGAEILRHPERSFDLKSVVIGNGLVDVLQQYKEYQPMFCGGGGVPAVVGPEVCDHL
DDTLAACNKLVETCYNNVTSANCVPVGGELCSNLTLPFYNETLNINPYDITKKCEPALDN
GCYNESDGMTRWLELPRVLTAIGAEHAWNGCSDNVSDLFYSTGDPFRPAQRDVTFMLQHG
LPVLIYAGAHDIICNWLGQRAWTDALPWHGHFKFRLKKLRPWHVDGKVAGAVKSHAGFTF
LRIEDAGHMVPHDQPKPALEMINRWISGDYWLVGEKH*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG