YALI0F11539g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0F11539g

Location

Species Yarrowia lipolytica Positions 1528839..1530112
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1274 (nuc.)
Previous locus YALI0F11517g Next locus YALI0F11561g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F11539g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F11539gYALI0F11539g_mRNA-001YALI0F11539g_CDS-001

Nucleotide sequence

 

>YALI0F11539g
ATGTCCAACAAGCCGTTTTCGCTCAAGCCTCTGGAGTCCACGGACAACTCCCCCAACTAC
AACAATCTGGTGTCGTCTTTCCAATCCACCTTTCAGTACTACCAGTTTGGCAATGAGCCC
TCCAAGGTCGAGACCATTGATCCCAAGCTCCAGGAGCAGCTCCCCAAGGAGGACATGCCC
AAGGAGCACCAGTCGGTGGCGGTGCAAGACATTCCTTCCCACGATCCGTACGCCGCATAC
TCGTTTCGATACGTGCATCCTCCGAGCATCAACTACCATCACAACTGGCAGGGAAACTAT
GCGCTGAACATGACAACGCTTCTGAACCGAGCCCAGAACTGCCAGGAGGACTGCGACGCT
ATGGACATGGATCCTTCCTACTTCAACGGAATCAACCCCAGCATGCTCAACGCCCCCGGA
GCCATGTCGCAGCATTACGCAACCATGGCTCACTACTCGCTGTCGCCAGCCTCGCCCACT
TCGGTCATGTCAAACATCCCCAGCAGTCTATCAACTCCTCCCGAGGAGGCCAAGAAGGAG
TATGAAGACCCCCTGCTGACCTTCACAACCGCAGGCTTCAAAATTCCCGACGACAAGTTC
GATTATTCGTCTGTTCTGCATCTCGAAAACGCAGCCATGGCCCAGAGCCATATCGCCCGA
GACTTTGAACTCATCCAGTTTGACACGGAGGAAACCAAACACGAGTTTCTCCGGCGGTGC
GGGAACCCCTTCTCCAACCTGTCCGCCACAGCCCCTATTCCCGAGGCCGAGTACTGCGCC
CAGCTCAACCCGGGAAAGGGAGGACGTCTCACGGTCTACGAGCCCATGTACAAGTCGTAC
ATTTCGACCAAGGTCCTGGAAGACTACTTTTTGAACGGCACTGTCATCAAACCTCGACCA
GGTAACCCCAAGTGTCTGTCCAAGGTCGACATTCACGGCCAGTGCCGGTACTGCGGCGAG
TTTCTCGTCATGCGAAACCACTCGTACTCGTCGCACATGTACTCCAAGCACGGAATCAGC
GCCACCACCAACAACGTGCTGCCTCTGCCCACCAAGATCTCGTCCATCGAGAACAAAAGA
GGAGGCATCAAGCTACAGGGGTACTGTTCCATCTGTCGCACCAACGTGGATCTCAACGAA
CGGGCCAAGGAAAACGAGTGGATCTCGTGGTTCTACCACCAGCAGGCCCACAATGTGGTA
GAGCGCAAGCAATAGACGGAGAGAGCAACAGTAGTGTATGTATATAGGCATAATTAATGA
AGCATGTGACAAGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F11539g_CDS-001

Protein length: 405 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0F11539g_CDS-001 MSNKPFSLKPLESTDNSPNYNNLVSSFQSTFQYYQFGNEPSKVETIDPKLQEQLPKEDMP
KEHQSVAVQDIPSHDPYAAYSFRYVHPPSINYHHNWQGNYALNMTTLLNRAQNCQEDCDA
MDMDPSYFNGINPSMLNAPGAMSQHYATMAHYSLSPASPTSVMSNIPSSLSTPPEEAKKE
YEDPLLTFTTAGFKIPDDKFDYSSVLHLENAAMAQSHIARDFELIQFDTEETKHEFLRRC
GNPFSNLSATAPIPEAEYCAQLNPGKGGRLTVYEPMYKSYISTKVLEDYFLNGTVIKPRP
GNPKCLSKVDIHGQCRYCGEFLVMRNHSYSSHMYSKHGISATTNNVLPLPTKISSIENKR
GGIKLQGYCSICRTNVDLNERAKENEWISWFYHQQAHNVVERKQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG