YALI0F11517g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0F11517g

Location

Species Yarrowia lipolytica Positions 1526278..1528353
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 2076 (nuc.)
Previous locus YALI0F11498g Next locus YALI0F11539g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F11517g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F11517gYALI0F11517g_mRNA-001YALI0F11517g_CDS-001

Nucleotide sequence

 

>YALI0F11517g
ATGGTCAAAACCTGGTCGGCCAAACGGCTCTGGAGCATTCTGTACGTGCTTCTGTGGCTG
CTGGGCATCCAGCTGACCCTCCTATTCGCAGCAATAGCCTACGTTGCGCTCTACCAGTTC
TACATCCCCGTCAACTCGCTCTCTCTTCCCCTGGACTTTGATTTTTCGACCGAAGACGGC
GCCTACGCGGTCGCCAAGCTTCATGGAGACGTGGTGTCGCTCAATTACGTCGAGCCCGCC
ACCCATGCGTTGTGGAAGTACGTGCCGTTTGTGTCCACCCCTTCGCCGGCTCCCGAGGCA
CCTCACAACCGGGTCACCACCTTTGGCCGTCCCCGCGACCGAATCAAAACGTTGCGGTTC
ATGAACATGCCCTATTCGGTCTATGTGAACCTGGATCTGCCCGAAACAGATCGCAATCTC
GGCACCGGCAACTTTATGATCCGGGTGTCGTTTGCAGACGACCTGGAGGTGTTCAGATCG
ACCCACAGACTCACCAGAGACAACAGAAAACGGTGGCCTCTGACTCACAACGAAGAGTAC
GCCGTGAGACCGAACGTGGGGTCCATCAACAAGAGAGAAAAGAGAGACAGAGCAGAAAAA
CTACACAAGGAAGACAGGATAATAACCGACCACCAGCCTGAACATCACCCCCTTCCTGCT
CTCTTTACAGCAACCCGCCCCGCCATTCTGGCATTCCAATCCGCAACCATGCGGGTCATG
GACACGTTGCTGTTTGCTCCTCTGTATCTGACAGGCTGGAAAAAACAGGAACAGCGGCTG
CACGTGTACATGGCTTCCAACTGGCACGTTCCCGCCGACGTTGAGGACCACGAGTTTGCC
TATGCCATTGTGGAGCTTGACCGAACCGTGGATATCTACGGAGCCCAGATTGAGTGGCGA
GTTGAGTGGACTGGACTCCGATACTTTATGTACCATCATAGGGCCCTTGCATTCTTACTG
GGAACAGCCGTGCTGTGGTACCTGGAGATATTCTACTTGGCAATTGCCTACTGGAGTGGC
AAGAAGATGATTCTGAAGCTCACTGGGGATACCACCAGGACGAGTCAGAGACCGCAAACT
CGAATTGGTGGAGCAGGTGCCGGGGGACCTGGTGAGCATGGAAGACCAGGAAGTCGAACT
GCTCGAATTGCAGACGACGCTGCTCTCGATGCCGATGATCCCGCTGAGGAAACAGACACT
CCCGACCGTTCTGAGCTCCACACCCGGTCGTCCGAAATTCAGCAACTTCTGGAAGACAGC
GAGACGACAGCAGGAGACTCTACGATTGGAGACACGACCGACAACGCTTCTGTGGCCTCT
CAGGACGAATTTTCTGTCGAGGAAGACGAGCACGAAAGTGTTTCTCTTTCGGCTTCTGAC
TCCAACGTGGAAGGTTACAGCGAGCGGCAGTCGTCTCGCATTGAAATCTGTGCCGGTGAC
TCGGACGACAACTCCCAGACCATAAGGTACCCTGTCTCTTGGCCCACTCCTCCTCCCGAG
GGTCCTTTAGCTCTGTCTCGCCAGGAACTCGAAAGCTTTACACGCTACAGATACGACCAG
GAGACTCCGGAGATTCTGTCGCGTGAAAACACAGACTCTCTGTCTGAGTCAGACGAGTTT
GATTTCGAAACGCAGCTGCAGATTGACCTACGGTCACTGGTAGCTCAAAACCGCCAGGAG
CGTCAGGAGAGACTGGAGCGACTGGAGCGATTGGAAGAGCTCCAAGCGGGCCCTTCTGGT
ACCACCGGAAGACGTACACCGGACCAGCGACCGAATTCTGCACCGCAGAGATTCTCTCCT
CGTCCTCCTCGGTCACCTGCTATTTCTGCACACAGTTCTCGGGGTTCTCTTCGGTCGTCA
CGGCTGAGCACTTCGACAACCACAGGTTCGAATCCAAGCTCCACCATTTCGCGCCAACGA
CACGTGACTCCGCTCACCACTCCCCTTCCTGCGCCTCCAGACGAGTCTCAGCGAGACGAC
GGGGACGACGAGTCGTTTGAGTAGAACGGGAACCGGGGCTTTTTGCTAACAAAATAACTT
ATTAATCAGTGATAATACAAGAAATTGATAAAATGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F11517g_CDS-001

Protein length: 668 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0F11517g_CDS-001 MVKTWSAKRLWSILYVLLWLLGIQLTLLFAAIAYVALYQFYIPVNSLSLPLDFDFSTEDG
AYAVAKLHGDVVSLNYVEPATHALWKYVPFVSTPSPAPEAPHNRVTTFGRPRDRIKTLRF
MNMPYSVYVNLDLPETDRNLGTGNFMIRVSFADDLEVFRSTHRLTRDNRKRWPLTHNEEY
AVRPNVGSINKREKRDRAEKLHKEDRIITDHQPEHHPLPALFTATRPAILAFQSATMRVM
DTLLFAPLYLTGWKKQEQRLHVYMASNWHVPADVEDHEFAYAIVELDRTVDIYGAQIEWR
VEWTGLRYFMYHHRALAFLLGTAVLWYLEIFYLAIAYWSGKKMILKLTGDTTRTSQRPQT
RIGGAGAGGPGEHGRPGSRTARIADDAALDADDPAEETDTPDRSELHTRSSEIQQLLEDS
ETTAGDSTIGDTTDNASVASQDEFSVEEDEHESVSLSASDSNVEGYSERQSSRIEICAGD
SDDNSQTIRYPVSWPTPPPEGPLALSRQELESFTRYRYDQETPEILSRENTDSLSESDEF
DFETQLQIDLRSLVAQNRQERQERLERLERLEELQAGPSGTTGRRTPDQRPNSAPQRFSP
RPPRSPAISAHSSRGSLRSSRLSTSTTTGSNPSSTISRQRHVTPLTTPLPAPPDESQRDD
GDDESFE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG