YALI0F10681t - Ylli_pol

Overview

Description Ylli relics, ENA|AJ319752 Yarrowia lipolytica LINE retrotransposon Ylli
Locus type mobile_element
Gene name Ylli_pol
Locus tag YALI0F10681t
Pseudogene This locus may contain pseudogene(s)

Location

Species Yarrowia lipolytica Positions 1434205..1435062
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 858 (nuc.)
Previous locus YALI0F10659g Next locus YALI0F10703g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F10681t oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F10681tYALI0F10681t_mRNA-001YALI0F10681t_CDS-001

Nucleotide sequence

 

>YALI0F10681t
CGACTCTGGCTCGTGAAATGGAGATACCCTGACGACCACGTTTTCACCAAGAAGAATCCA
GGATGCGGGCTCTGTGATAAGGCCATCATTCAGGATCTGCACGAGCATATCTTCTGCAAG
TGCGAAGTTCTTCTTTCCATGTTGACCAAGATGAAGATTCCGTCAGTGGACTCTCTAAAG
GACTGGATCTTTACCGAGTCGAAATGTGGAGTACTCCCCTCTTTCCCAGGGCATGTGAAC
AGTGACGCCCCCCGGAAACATCAACAAGTCAAGACACGCAAATATCTGCGGGAATTGGCT
TATGGGATCTGGAAGATGGAGAGATCCCTCCGGTACTCAGGGGACGACGCCACCCTGGGA
CATGTCCAACAGGGTTTGCTTCAATTCCTGAAGGAAGCCCAGATGTGTTTCTACGATGGA
CAACCGCCAGCACTTCACGATGAGCGAGAGTAGAGACAGTAGCAAGCGTAAAAGGCGGCC
GAGGCCACCGAGAGAACAGCGTAGCAGGGCGCGTAGTCACCACAGGGGACGCAGAACCAA
ACCAATGACGAAGAAGAACCACAAGGAGACGTTTTCAAAGGCAATGCAAACGAAGAGGGC
AATGGAGGGATTGAGATTAGAGAACTGGAGACTGGAGTGGCGTTTTCCCGATGAACGAAC
AAACACGCGAAGTTAGGTGGACCAAAATACAACACGGACTGAACCAGGTTTTTTTATGAT
TTTTTTACTGGAAAAAGGTACGTGCCATGACACTAAACGTGTTTAATTAGTAATATTCGT
GTATGCGTACATTCATTTCAAAGGTTATTCTTTCACAGCAAAGTTATAATTAATGAATGT
ATATGCAGAAAAAAAAAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F10681t_CDS-001

Protein length: 151 aa.
Gene: Ylli_pol

>YALI0F10681t_CDS-001 RLWLVKWRYPDDHVFTKKNPGCGLCDKAIIQDLHEHIFCKCEVLLSMLTKMKIPSVDSLK
DWIFTESKCGVLPSFPGHVNSDAPRKHQQVKTRKYLRELAYGIWKMERSLRYSGDDATLG
HVQQGLLQFLKEAQMCFYDGQPPALHDERE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG