YALI0F09856g

Overview

Description similar to uniprot|P40055 Saccharomyces cerevisiae YER082c
Locus type CDS
Locus tag YALI0F09856g

Location

Species Yarrowia lipolytica Positions 1342842..1344434
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1593 (nuc.)
Previous locus YALI0F09834g Next locus YALI0F09878g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F09856g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F09856gYALI0F09856g_mRNA-001YALI0F09856g_CDS-001

Nucleotide sequence

 

>YALI0F09856g
ATGTCTGAAGCACCAAAGAAGAAGCCGGCCTGGAAGACGGCCCGAAACAAGGAGCTCCGT
AAGGATCTCAAGCGGGTGGAGAGCCACACCCAGGAGGCCAAGGAGGCGGCGAAAAAGACA
GAAATGCTGCTGTTGGAGGAACAGGGCTTTCTAGAGGCCGAAAACGAAATGGAGGCGACC
CACAAGGTGACGCAGGAGGAGATCAAGGCGTCGGTTGATATTTCCACCAAGAAAAAGGCC
TACGACCTCAAGCTGCCCGACTTTGGCCCCTATGACATCAACTTCACCCGAACAGGCCGA
AAGCTGCTCATTGGAGGCCGAAAGGGCCATGTGGCAGCGTTTGACTGGCGAGAGGGACGT
CTACAGTTTGAACTCAACCTCAACGAGACTGTTCGTGCGGTCCAGTGGCTCCATAACGAC
CAATACTTTGCTGTGGCCCAGAAAAGGAATGTCTTCATCTATGACCACCAGGGATCCGAA
GTACACAGACTCAAGCAGCAGATCGAAATGACCAACCTCGATTTCCTGCCCTACCACTAC
CTGCTCGTATCGTCGGGTCTCACCAGCATGCTCTTTTACCAGGATGTATCTATTGGTAAG
CAAGTGGCTGCCTTCAAGACCAGACTGGGCCCCACCACCTCCCAGTGCCAGAACCCCTAT
AATGCCATCATGAATCTCGGCCACTCCAACGGAACCGTGACCATGTGGTCGCCCAACGTG
GACGAGCCTCTGGTCAAGATGCTGGCCCATCGAGGCCCCGTGAACGACGTTTCTGTCGAC
CGATCAGGACGATACCTGGCCACGGCTGGCTCCGACTCGTCCGTCAAGGTCTGGGATATC
AGAAACACCTACAAGGAGGTGCTGCGTCTGCCCCGAACCAAGGTGGCGCCCCAGACGGTT
AACTGGTCTGACTCCAACCTGCTTTCTGTGGGCCACGGAAACACCATCACCGTGTGGAAG
GACGTGCAATCTGCTCCTCGACCCAAGCAGCCCTATATGCAACACAACATGCATCCCGAC
TGGAAGGTGAGCAGCGCGCAGTTTGTGCCGTTTGAAGACATCCTTGGAGTAGGCCACTCC
GAGGGCTTCTCTTCACTCATCATTCCCGGAGCCGGAGAGGCCAACTTTGACGCTCTGGAA
GTCAACCCTTACCAGACGCGACACCAGCGACGAGAGGAGGAGGTGCGAACACTGCTGCAG
AAGCTCCAGCCCGAGATGATCACCATGGATCCCGAAGACATTGGACGAATCGCCATGGAC
AAGGACCGGCGACGAAAGACGGCCCGAGAGCAGATGGAGGAGATCACGGAGCCCAACAAG
AAGCGGGCACAAGAGTCGGACGACGACATGCCCGAGCTGCAACCCCATCTGGCCGACGAG
GAGACGGCCGTCAGCAAGGAGCTGCAAAAGAAGAAAAAGAAGGGTGTGGTGGACGAGCGG
CAGATGCGACTGGAGCAGCTTCAGGAGCGAGAGCGACGAATGCGAGAGAACAAAAAGCGA
CGACTGGAGGAGGGATATGTGGAGGAGTACGTGTCTCCTGCTATCTCCAGATTTCAGCAG
AGACAATAGATAATTTATGCATATTGAACGAGC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F09856g_CDS-001

Protein length: 523 aa.
Product: Nucleolar protein, putative

>YALI0F09856g_CDS-001 MSEAPKKKPAWKTARNKELRKDLKRVESHTQEAKEAAKKTEMLLLEEQGFLEAENEMEAT
HKVTQEEIKASVDISTKKKAYDLKLPDFGPYDINFTRTGRKLLIGGRKGHVAAFDWREGR
LQFELNLNETVRAVQWLHNDQYFAVAQKRNVFIYDHQGSEVHRLKQQIEMTNLDFLPYHY
LLVSSGLTSMLFYQDVSIGKQVAAFKTRLGPTTSQCQNPYNAIMNLGHSNGTVTMWSPNV
DEPLVKMLAHRGPVNDVSVDRSGRYLATAGSDSSVKVWDIRNTYKEVLRLPRTKVAPQTV
NWSDSNLLSVGHGNTITVWKDVQSAPRPKQPYMQHNMHPDWKVSSAQFVPFEDILGVGHS
EGFSSLIIPGAGEANFDALEVNPYQTRHQRREEEVRTLLQKLQPEMITMDPEDIGRIAMD
KDRRRKTAREQMEEITEPNKKRAQESDDDMPELQPHLADEETAVSKELQKKKKKGVVDER
QMRLEQLQERERRMRENKKRRLEEGYVEEYVSPAISRFQQRQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG