YALI0F09834g

Overview

Description similar to uniprot|P32565 Saccharomyces cerevisiae YIL075c SEN3 26S proteasome regulatory subunit
Locus type CDS
Locus tag YALI0F09834g

Location

Species Yarrowia lipolytica Positions 1339393..1342373
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 2981 (nuc.)
Previous locus YALI0F09812g Next locus YALI0F09856g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F09834g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F09834gYALI0F09834g_mRNA-001YALI0F09834g_CDS-001

Nucleotide sequence

 

>YALI0F09834g
ATGGCCACCACCGCAGCCCCAATTCTGGCGCTGCTCGACGAACCAAACTACGATCTCAAG
ACCCATGCCCTCGAATCGCTGGATGAAAACATCACCCAGCTGTGGGCGGAGGTTTCCGAC
CACGTGTCCCAGATTGAAGAGCTCTACGAAGACAAGGACTTCCCCAAGCCCGAGCTCGCG
GCTCTCGTGGCCTCCAAGATCTACTACAACCTGGGCGACTACGAGTCATCCATGAAGTTT
GCTTTGGCCGCTGGAAAACTCTTCAACTTCGATTCCTCCTCTGATTACGTCGAGACCATT
GTCAGCAAGTGCATCCGAGAATATATTGAGGTGTCGCAACAACACTACGAGGATCCGTCT
GCGCCTGTTCCCGACGCCCGTCTCGCCACGGTGCTCGACCAAATGCTGCAGCGATCGTAC
GCCCAGGGCCACCTGAAGCTGGCTCTCGGAGTGGCGCTGGAGGCCCGACGTTTGGACATT
ATCACCAAGATCCTCGAGACCGCAGACACCGAAACGACCGTGGAGCTGGTGCATTACGTG
TTGGACTGCGTCGTAACGGTCGTCTCTTCGCGCCGGTTCAAGGACGAGGTGCTGTTGGAG
CTCAACAATGTCATCCTGGGTCTGCCCCAGCCCGACTACCACGCCATCTGCAAGATCATC
GTCCAGCTCAACAGCAGCGAAGGCGCCTCTCGGCTCTTCAAGTCTCTGTTGGCCTCCAAG
GACCCCGACTCCACCCTCATTGCGTACCAGTGCGCTTTTGATCTAGTGGCGTCAGGCTCG
CAGCAGCTGCTCAACGAGGTTGCCGCCGAGTTCAAGGACAACGAGACCCTCGCAAAGATC
CTCTCCGGCGTCCCTACCTGCGACTACGACCTCACATTCCTTAACCAGAACAATAACACC
GACACACAGATGCTCAACCGGACCAAAAACTCGCTTGACCCCAAGAGCTCCATGAACCAC
TCGGCCGTCACCTTTGCCAACGCATTTCTGCACGCCGGCACAGCCCAGGACTCGTTTATC
CGCTCCAACCTCGACTGGCTCTCCAAGGCCTCCAACTGGACCAAGTTGTCGGCCACGGCT
GCTCTGGGAGTCATTCACAAGGGAAACCTGTCGCAGGGCCGACGAATTCTCGCTCCCTAC
CTGCCCCAGGGCGATAATGCTGCCTCCGGCTCACCCTACACCCGGGGAGGCTCTCTGTAC
GCCCTTGGTCTCATCTTTGCAGGCCATGGCAACGAGGTGCTCGACTACCTTCAGCAGCAG
ATTGAAGACACAGCATCCGACGACGGAGGCGATGTTGTGCTGCACGGTGCCTGTCTGGGT
ATCGGTGTGGCTGGCATGGGCTCCGGAAAGGCCTCTCTTTACGACAAACTGAGAGACGTG
CTGTTTTCGGACTCTGCCGTGGCCGGAGAGGCTGCCGGACTCGCCATGGGTCTGGTAATG
CTGGGATCTGCCGACGATGATGCCCAGAAGGAAATGTTCCTTTACGCACACGAGACTCAG
CACGAGAAGATCATTCGGGGTCTGGCTCTGGGCCTTGCTCTTGTCAATTACGCACGAGAG
GAGTCTGCCGAGCCCATGATCGAGCAGCTGCTGGCCGAGCAGGACCCCATTCTGCGGTAC
GGAGGAGCCTACACCATTGCTCTTGCCTACGCCGGCACCGGCAACAACAAGGCCATTCAG
CGACTGCTGCACATTGCTGTTTCTGATGCCTCTGATGACGTGCGACGAGCAGCTGTCATT
TCGCTGGGTTTCATCCTTCTGCGTAACTACACTGCCGTCCCCCGAATGGTCGAGCTGCTG
TCCGAGTCGCACAACCCCCACGTGCGGTACGGAACTGCCCTGGCCCTCGGTATTTCGTGT
GCAGGCACAGGTCTCAAGGAGGCGGTGGAGGTGCTTGAGCCTCTGACTAAGGACCCCGCA
GACTTTGTGCGACAGGGTGCTCTTGTGGCTCTCGCCATGATCCTCATCCAGCAGAATGAG
AAGATGAGTCCTCGAGTCAAGACTGCCCGGGAGACCTTTGCTCATGCCATTGCCTCCAAG
CACGAGGACCCCATGGTCAAGTTTGGTGCTGCTCTAGCTCAGGGTATCATTGATGCCGGA
GGTCGAAATGTGACCATTGCTCTTGAGAACCCCCAGACTGGGTCTCTTAACATGAAGGCC
ATTGTCGGTCTGGTTGTCTTCTCGCAGTTCTGGTACTGGTTCCCCTACACCCACTTCCTG
TCTCTGTCATTCAGCACCACTGCTGTCACCGGAGTCAACGAGGACCTCAAGATCCCCCAG
TTTGACTTTGTCACCTCTCACAAGCCCTCCTACTTTGGCTACCCTCCTCCTGCCGAGGAG
GTGGTTGACAAGGCTCCCGAAAAGGTTGCCACCGCCGTTCTCTCTACCACAGCTCGTGCC
AAGGCTCGGGCCAAGAAGAACGAGAAGGATAAGGCTGACAAGATGGAAGTTGAGGAGAAG
CCCGAGGAGCCCTCCTCCGCCGCTGCAGCATCTTCAAAGCCTGCCAAGGAGGCCAAGGTG
GACGAGGACGCTGATAAGCGAATCCCCGGTCAGAAGAAGTGGCGTCTTGCCAACTTAACA
CGAGTGCTGCCTTCCCAGCTCAAGTATATTTCGTTTCCTGAGGAGAACCGGTTTGTGCCC
ATTCGAAAGTTGCATTCTGTTGGTGGAGTTGTGGTTCTGAGAGACCAGGAGAAGGGCAAG
GGCGGCAAGAAGCCTCAGTTCATCAAGACGGTCCGACAGATCAACAATCCTTTTGATGAT
GAGGACGACGAGGCTCCTCTGCCCGAGCCTTTCAAGTACGTCGAGGAGACCGAGTAAGCA
TATTGGTAATGATTGTTGGAGAACCGAGCAAGGGCGTAGAGTGCCTGTAGATGGAGCGCA
CAAATGACTGGGCGTGTACACTGTTGTTGTGCAGTTGTAACCAATATATAAAGAACAGCT
TGCAATGGAAGGTGCAATAGAACATGGAGTTGAAAACTAGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F09834g_CDS-001

Protein length: 939 aa.
Product: Subunit of the 26S proteasome, putative

>YALI0F09834g_CDS-001 MATTAAPILALLDEPNYDLKTHALESLDENITQLWAEVSDHVSQIEELYEDKDFPKPELA
ALVASKIYYNLGDYESSMKFALAAGKLFNFDSSSDYVETIVSKCIREYIEVSQQHYEDPS
APVPDARLATVLDQMLQRSYAQGHLKLALGVALEARRLDIITKILETADTETTVELVHYV
LDCVVTVVSSRRFKDEVLLELNNVILGLPQPDYHAICKIIVQLNSSEGASRLFKSLLASK
DPDSTLIAYQCAFDLVASGSQQLLNEVAAEFKDNETLAKILSGVPTCDYDLTFLNQNNNT
DTQMLNRTKNSLDPKSSMNHSAVTFANAFLHAGTAQDSFIRSNLDWLSKASNWTKLSATA
ALGVIHKGNLSQGRRILAPYLPQGDNAASGSPYTRGGSLYALGLIFAGHGNEVLDYLQQQ
IEDTASDDGGDVVLHGACLGIGVAGMGSGKASLYDKLRDVLFSDSAVAGEAAGLAMGLVM
LGSADDDAQKEMFLYAHETQHEKIIRGLALGLALVNYAREESAEPMIEQLLAEQDPILRY
GGAYTIALAYAGTGNNKAIQRLLHIAVSDASDDVRRAAVISLGFILLRNYTAVPRMVELL
SESHNPHVRYGTALALGISCAGTGLKEAVEVLEPLTKDPADFVRQGALVALAMILIQQNE
KMSPRVKTARETFAHAIASKHEDPMVKFGAALAQGIIDAGGRNVTIALENPQTGSLNMKA
IVGLVVFSQFWYWFPYTHFLSLSFSTTAVTGVNEDLKIPQFDFVTSHKPSYFGYPPPAEE
VVDKAPEKVATAVLSTTARAKARAKKNEKDKADKMEVEEKPEEPSSAAAASSKPAKEAKV
DEDADKRIPGQKKWRLANLTRVLPSQLKYISFPEENRFVPIRKLHSVGGVVVLRDQEKGK
GGKKPQFIKTVRQINNPFDDEDDEAPLPEPFKYVEETE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG