YALI0F09790g

Overview

Description highly similar to uniprot|P05759 Saccharomyces cerevisiae YLR167w UBI3 ubiquitin/40S small subunit ribosomal protein
Locus type CDS
Locus tag YALI0F09790g

Location

Species Yarrowia lipolytica Positions 1337014..1337708
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 695 (nuc.)
Previous locus YALI0F09768g Next locus YALI0F09812g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F09790g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F09790gYALI0F09790g_mRNA-001YALI0F09790g_CDS-001

Nucleotide sequence

 

>YALI0F09790g
AGAAAGACGGTGAGTAATAACGACACACCACACGGTGGCGAACGCAGCGAACGCAGTGGA
GCGATGCAAAAGCTGAAGAGCAGGACCTCAAGGAGCAACCACTAACAACAGCACAGTTTT
CTTTGCAGACGACACCGAAATGCAGATTTTTGTCAAGACCCTTACCGGTAAGACTATCAC
CCTCGAGGTGGAGTCTTCCGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGA
GGGAATTCCCCCGGACCAGCAGCGACTTATCTTCGCCGGTAAGCAGCTCGAGGACGGCCG
AACCCTTTCTGACTACAACATCCAGAAGGAGTCCACTCTCCATCTCGTCCTGCGACTTCG
AGGTGGTGGTAAGAAGCGAAAGAAGAAGGTCTACACCACCCCCAAGAAGATCAAGCACAA
GCGAAAGAAGAACAAGCTTGCTGTCCTCAACCTCTACAAGGTTGACGATGACGGAAAGGT
TGAGCGACTTCGACGAGAGTGTGAGTCTGAGTCCTGCGGTGCCGGTGTCTTCATGGCTGA
CATGAAGGACCGACAGTACTGCGGCCGATGCCACCTCACCCTCAAGGCCTAAATGTATTG
ATTTAGTTTAGTATATTTATCTCTTGAACAAAAATCAACGCTGTAGATTGTTTAAAAATT
TTCTAAGTAGAGCTGAACACCGCAGCGTCTGTTTC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F09790g_CDS-001

Protein length: 151 aa.
Product: Ubiquitin, putative

>YALI0F09790g_CDS-001 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGGKKRKKKVYTTPKKIKHKRKKNKLAVLNLYKVDDDGKVERLRRE
CESESCGAGVFMADMKDRQYCGRCHLTLKA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG