YALI0F09581g

Overview

Description some similarities with uniprot|P49777 Schizosaccharomyces pombe ARS-binding protein 1
Locus type CDS
Locus tag YALI0F09581g

Location

Species Yarrowia lipolytica Positions 1313234..1315038
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1805 (nuc.)
Previous locus YALI0F09559g Next locus YALI0F09603g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F09581g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F09581gYALI0F09581g_mRNA-001YALI0F09581g_CDS-001

Nucleotide sequence

 

>YALI0F09581g
ATGAACCAAACACCGCAACGAATGCCGCCGGAGAACATCTACAGAAAGGAGCAACCCACC
CTGTTCCCTCACGGCTACCCTACTCCAGTCTCCTCCAACACCAGCATCAACCTTCCTCTA
CCCAACTCGGGGTCGCCGCTACCCATTCCTTACACCCCAGCTCCAGTCAAGTTCGAGTAC
TCGTTCCAGCAGTCGCCCTCCTTCCCCAAGTATGCAAAATACCAAATCAACCCGTCCTTT
GACTTCTCAAAGACAGGCATGGCCCACCTTGGCGTCAATTCGCCGGTTCCTATCACTCCG
GTGCTTCCCCCACCTAGCTCCATGGCTGCTCCTCCCATCTTCCAGAGCCGGACTCTAACA
AGACCTTTGTCCAGCCCCGACAAGACTCCCTGCAAACGTTCCCGTGTAGAGGAACGGCAA
GAGGTGTCTGATTACGACAGAAAATGGGTCCGAATGCAGTTTGGTCTGCCCCGAACCGGA
GGTTACCAGAAGCCGTTCCGAAAGCGCCAGACTGACGTTCAGAATGAGTTCCAGGAACGT
TTCGGACGATCCCTGTCTCCTTCAACCATCTCCAAAATCCTCTCGGACGACTACTCGTAC
CTGGACACAATGTCGCTGAACGAGGTGTCCAAGTCTGTGTACAGAAAGCGAAAGCCGCGG
TTCGAAATGCTAGAAGACGCAGTTTCGTCCTGGTGCGAACTGTACACCCGAAGAGGCTGT
CTTAGCGAACGAGTGCTCAAGGAGGCTGCCGAGAGACTCCACGCTCATCCTCTTATCGAC
ACCAGCACCGCCGACGAAGAGGCCCCCGTGTTCTCAAACGGCTGGCTTCACAATATCAAA
ACAAGACGAGATCTGTCTCGGCTTCTGTGGGACAGCACCATTTCTGAGCAGGAAACCTGT
GTCTCCACTCTCAACCACATTCGAGAGACCATCACACGACTGGGCCTGACTCCAAAGAGC
GTCTATGCTGTTGGAGATACTCAGCTGTACCCTTCGGCCACTCCTGGATCCCGGTTTGGA
AACGACTCCACCCCCTGTACTGCTCGAACCGTGCTCATTTGCACTAATGCCGATGGTTCG
TCCAGGCAGAAGATGTACCCAACCATGGTGGGTCCGGATATTGCCGACGCCAACAACCGA
AGTGCTACCAGCCTTGTCTACTCGCCTACAGGCACTCCCGAAACACAGAACTTCCTGGAC
TTTCTGTTTGACTTTGACAATTCGCTCACGGAGCCCTCGCTGCTGATTCTGGCTCAGCAT
CCCCACTATGAGAAGGCTACTCAGATCTTCCGTCACCAGACAAACAACTCCAACCTCCAC
ATCATTCTAGTGCCAGCTCGAATCAAAAAAAAGCTGCTAGCCACCGACCTCGGAATCGCA
GGAGACCTCAAGGTGGCATACAAGATCAACCGGTTGTACACGCTCCCTCACAAGCGAATG
AAGACCTCCAAGATCCTCCGGTCGCTCGACACCGCCTGGGGCAATGTCAGCGAGGAGACC
ATTCTCAAGGCCTGGAGAGAAACTCGCATCTTCGCCACTCTCAACTTCCCCGAGCTCGCC
GATACTGGTGCATCTCAGCCCGACCTCAAGCTGATTCGAGCAATTGCAGGAGTCCAGGCT
TCGCTGATGAACCAGCAGGTTGCCTTTTCGGAGAGCCAGTACCAGAGTTTTTTCAACCAC
GACGGAGAAGACGACCCGTTGGCTGTCAAGGATTGCGTCGAGCAGTACGCCTCCATTGTT
CAGAACCGCTGAATCCACTGAATCCGCGCATATTTATATATTTATTAATCCATCGTAGTT
GTTTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F09581g_CDS-001

Protein length: 584 aa.
Product: Conserved hypothetical protein

>YALI0F09581g_CDS-001 MNQTPQRMPPENIYRKEQPTLFPHGYPTPVSSNTSINLPLPNSGSPLPIPYTPAPVKFEY
SFQQSPSFPKYAKYQINPSFDFSKTGMAHLGVNSPVPITPVLPPPSSMAAPPIFQSRTLT
RPLSSPDKTPCKRSRVEERQEVSDYDRKWVRMQFGLPRTGGYQKPFRKRQTDVQNEFQER
FGRSLSPSTISKILSDDYSYLDTMSLNEVSKSVYRKRKPRFEMLEDAVSSWCELYTRRGC
LSERVLKEAAERLHAHPLIDTSTADEEAPVFSNGWLHNIKTRRDLSRLLWDSTISEQETC
VSTLNHIRETITRLGLTPKSVYAVGDTQLYPSATPGSRFGNDSTPCTARTVLICTNADGS
SRQKMYPTMVGPDIADANNRSATSLVYSPTGTPETQNFLDFLFDFDNSLTEPSLLILAQH
PHYEKATQIFRHQTNNSNLHIILVPARIKKKLLATDLGIAGDLKVAYKINRLYTLPHKRM
KTSKILRSLDTAWGNVSEETILKAWRETRIFATLNFPELADTGASQPDLKLIRAIAGVQA
SLMNQQVAFSESQYQSFFNHDGEDDPLAVKDCVEQYASIVQNR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG