YALI0F09427g

Overview

Description weakly similar to uniprot|F2SN33 Trichophyton rubrum hypothetical protein TERG_04345
Locus type CDS
Locus tag YALI0F09427g

Location

Species Yarrowia lipolytica Positions 1302178..1302834
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 657 (nuc.)
Previous locus YALI0F09405g Next locus YALI0F09449g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F09427g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F09427gYALI0F09427g_mRNA-001YALI0F09427g_CDS-001

Nucleotide sequence

 

>YALI0F09427g
ATGGTGTGCTGGATGCAGCATAATGTGAGATCTACGGGTACGTTATCGGGAATATCAAAC
TACAAGTACGGATACACGATAGCTACTTGTCTTTCATTTTCGACACCAATGACCAAACGT
GAGTACTGTGCTAGATTTGCAGTTGGAAGTCCCCCTCTTGCCGCCCTTGTTACTAACACA
GCACATCCACTACTCTCACAGGTACCCCTGATTGTATCGCCGTCGATTCGACCCCCACAA
GCCGTGACGCTGCCATTCGAGTACAAGTCGTTACCGGCCAACATGCCGCAGGCGGTCAAT
GAAGACGATATTCTCGACACACTCGGGCAGCTGAGTCAGAAGCTGGAACAGCTGGAGCAG
GATCATAGAGCCGCGGTAGCGACATACCAGAGCTGGCGGGAGAACGTGGACCAGCAGACC
CGGGAAGAACAGCGCAAGATTGCTCCTGGATACCTGGATTCAGTGGACCGAATTCTGGTG
CCTCAGAAGAGGACCGAAACTGTGGAGCAGGAGCAGGAGATGGACACCGAGGAGGACGGC
AAGGAGGAGGAGCCCGTCAATGAGCTGGACAAGGCCTTTGGAAAGGTCGGGCTGGAGTAA
CCACGCCGGTTGGATATTGAACTATTTGCATATTATGAACGTTATGATTGACTGTTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F09427g_CDS-001

Protein length: 179 aa.
Product: Conserved hypothetical protein

>YALI0F09427g_CDS-001 MVCWMQHNVRSTGTLSGISNYKYGYTIATCLSFSTPMTKPHPLLSQVPLIVSPSIRPPQA
VTLPFEYKSLPANMPQAVNEDDILDTLGQLSQKLEQLEQDHRAAVATYQSWRENVDQQTR
EEQRKIAPGYLDSVDRILVPQKRTETVEQEQEMDTEEDGKEEEPVNELDKAFGKVGLE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG