YALI0F08833g

Overview

Description weakly similar to uniprot|P15424 Saccharomyces cerevisiae YDR194c MSS116 RNA helicase of the DEAD box family
Locus type CDS
Locus tag YALI0F08833g

Location

Species Yarrowia lipolytica Positions 1232980..1235118
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 2139 (nuc.)
Previous locus YALI0F08811g Next locus YALI0F08855g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F08833g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F08833gYALI0F08833g_mRNA-001YALI0F08833g_CDS-001

Nucleotide sequence

 

>YALI0F08833g
ATGTTCGACTCGACCAAGTTGCCTGCCTCTGAATTCGAGCAGCGATACGGACGAGTCCCC
GACCACGGCGAGACCATCTGGTCCGATCTGGTGGCCGAAGGAGTGACTGCTCCCGAGGGC
AAGTCGCACATGACCAACCTGACGTTCCAGGCGCTGGGCGACAACAAGGTGCTGACTGCG
GATCTGTCCGACTCGCTCAACAAGATGAACTTCACCAACATGTCCGAGGTGCAGGCCCGA
ACCGTTCTGCCTGCTCTCAAGGGCGAGCATATGCTGGTGAAGGCCAAGACCGGTACCGGT
AAGACGGCCGCGTTCTGCATCCCCGCTCTCCAGCGAGCCCGAGACGCCAAGATCATCGAC
GGAGTCCAGGGCCTCAAGTCTCTGGTCATTTCGCCCACTCGAGATCTGGCCCAGCAGACC
CTGGCCTTCCTCAAACAGGTGACCGCCAAGGGCCCCCTTAAAGACCTGACAGTGGCTGAG
GCCGTTGGAGGAACCTCGGTTCGTCATCTGTTGAACGAGACCGTCAACGACTACGATGGC
GGAGCCGACTTTCTGGTCGCCACCCCCGGACGTCTGCTTTTCCTGCTCAAGGACCCCCAG
GCCGCCGAGTACTTTGCCAACATTGACTCCGTGATTCTGGACGAAGCCGACACGCTGCTG
GACCAGGGCTTCGAGGCCGATCTCTGCGAGATTGTGCGTCTCATCTCCACCTACACTAAG
GACCCTTACCAGCGAAACTTCTACTCCGCCACTCTGGACGACCGAGTCAAGCGGTTTGCC
ATCAAGAACTGCCAGGGCCGAGTGCGAGTGGTCGACGCTGTTGGAAAGGAATCCCCCGCC
CAGGATCTGGTCGAGCAGCGGTTCGTCAAGATTGAGGAGCTGGGAGACATGCTGACCATC
ATGGCTCAGGATATGAAGCGAGATGCTGCCGAGACTCTGCCCAAGGAGCCCTTCAAGGCC
ATTGTCTTCTGCCCCACCAAGCGTCTCACCGAGACCAACCACGCCATTCTCAAGCAGCTG
GTGTACGAGCAGGGCGACATTTTCGGCTGTGAGGCCCGAAACGTCTTTTCTCTGCACTCG
GATATGTCCCAGAATGGCCGTCTTCGAGCCGCCGAAAACTTCCGAAACACTCCTCATTCG
ATACTCGTCACCTCTGACGTTGCTGCACGAGGTATGGACTTCCCCAATGTGACCCACGTC
TACCACTACGGAGTCACCAACCAGTTTGAGCCCTACGTGCACCGAATGGGCCGATGTGGA
CGAAACGGAGCCACCGGAGTCTCCACCATGTACATGATGGAGCACTCCAAGTGGTACCTG
ACCATGCTCAAGCGAAACAAGATGCTTGACAACGCCGACAAGGTCAAGATTCTGGAGGAG
GAGCCCGAGGAGTCCGTCAAGGAGAACGTGGCTAAGGCCACTAAGGCTGCCTTTTCCTCC
GGAAAAGACAAGACTCCCAACGGCCACGACGCTTCGCGAATCGCCTCGGCCGTGACTTCG
TTCATGGGCTATTACAACTCGTGTTCGCCCGACATGAAGCCCAACGACAAGCCCAAGCAG
GTTTTCTCCTCGTTTGTGTCGCTGTGTCGGTCTCTTGGAATGGAGGGCAACCTCAACTTC
CAGTCTCTCGACCGATCAGGCATGTTCTCCCAGAACTTTGGTATTGATCGACGAGACATT
TCGCAGCTTGCCATTCCTCGACGAGACGCCGTTCCCCAGTCTATCTCCGAGACTTTGTTT
GGAGTTGACGCCAATGACATTGACTACAATGACACCACCTCTCAGGCCGACAGGCTCCGG
GCTCAGCGAGGCGGCAGCCGGGGAGGTAACCGAGGCGGCTACAACAGCCGAGGAGGTGAC
CGAGGTGGATACAACAAGCGAGGAGGAGATCGGGGTGGATACAACAGCCGAGGAGGAGAT
CGAAACAACTACCGAAATGACCGTGGAGATCGAAACTACGACCGAAATGATCGAAACGAC
CGAAACAACAACAGATACAACAACCGAAACGACCGAAACGACCGAAGCGGAGGAAACTGG
GGCAAGCGAGAGCAGTACTAAGGTGCTGGCTAAAAAACAGACGGCTAGTCTGTAATGATA
ACAATTGTACATAGTTAATTGACTGATATTGAACAGAGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F08833g_CDS-001

Protein length: 687 aa.
Product: Conserved hypothetical protein

>YALI0F08833g_CDS-001 MFDSTKLPASEFEQRYGRVPDHGETIWSDLVAEGVTAPEGKSHMTNLTFQALGDNKVLTA
DLSDSLNKMNFTNMSEVQARTVLPALKGEHMLVKAKTGTGKTAAFCIPALQRARDAKIID
GVQGLKSLVISPTRDLAQQTLAFLKQVTAKGPLKDLTVAEAVGGTSVRHLLNETVNDYDG
GADFLVATPGRLLFLLKDPQAAEYFANIDSVILDEADTLLDQGFEADLCEIVRLISTYTK
DPYQRNFYSATLDDRVKRFAIKNCQGRVRVVDAVGKESPAQDLVEQRFVKIEELGDMLTI
MAQDMKRDAAETLPKEPFKAIVFCPTKRLTETNHAILKQLVYEQGDIFGCEARNVFSLHS
DMSQNGRLRAAENFRNTPHSILVTSDVAARGMDFPNVTHVYHYGVTNQFEPYVHRMGRCG
RNGATGVSTMYMMEHSKWYLTMLKRNKMLDNADKVKILEEEPEESVKENVAKATKAAFSS
GKDKTPNGHDASRIASAVTSFMGYYNSCSPDMKPNDKPKQVFSSFVSLCRSLGMEGNLNF
QSLDRSGMFSQNFGIDRRDISQLAIPRRDAVPQSISETLFGVDANDIDYNDTTSQADRLR
AQRGGSRGGNRGGYNSRGGDRGGYNKRGGDRGGYNSRGGDRNNYRNDRGDRNYDRNDRND
RNNNRYNNRNDRNDRSGGNWGKREQY*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG