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  6. YALI0F08811g

YALI0F08811g

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Overview

Description weakly similar to uniprot|B8MS30 Talaromyces stipitatus conserved hypothetical protein
Locus type CDS
Locus tag YALI0F08811g

Location

Species Yarrowia lipolytica Positions 1227701..1231051
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 3351 (nuc.)
Previous locus YALI0F08789g Next locus YALI0F08833g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F08811g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F08811gYALI0F08811g_mRNA-001YALI0F08811g_CDS-001

Nucleotide sequence

 

>YALI0F08811g
ATGGCCGAGTCGACCCAGACCTTCTATCCTGCGTCGTCGTCGTCGTCGGACATGCCGCCG
CCCCAATACGACTATAATAACGTGGCGCCGCCAACTTTTTTCTATGGTGAGTCCAGCACG
CCTTGCCCTCCACTCAGTGTGTCTTCTAACCCAGATAAAGGAGACTCTTTTAACGTAAGC
GGAGAGAGCCCCTCCTTGGCATATAATCAGGGCCCCGAGTTTGCGCCCCAGTTTGCTCCC
CAGGATGTTTATACCGACCCTTCCCAGGACTATTCGTGGATGGAGACCCAGCATCTAGGC
CAGCAGCATCTGGGCCAGCAGGACCAGCAGCAACACCTGGGACAGCAGCATCTGGGCCAG
CATCTGGGTCAGCATCTGGGTCAGCATCTGGGTCAGCAGCCTCAGGGCCAGCAGCCTCAG
GGCCAGCAGCCTCAGGGCCAGCAGCCTCAGGGCCAGCAGCCTCAGGGCCAGCAGCCTCAG
GGCCAGCAGCATCAGGGTCACACGTTCCTGGACCCCCAGTTTCAACAGTACAATCAGTTC
CAGGAGTATGACCAGACCCATCCCCAGACACGGGCACTCCCGCCCCAAAGTCAACACAGT
GTCAGTCCCATGCCCACCAGTCACAGCAACAGTCCGGTGTCCACTGCCAGTCCTGTACCC
CAGACCCAGGCTCCGCCTCCGCCGGTGCAAACTCCGTCTGCCGGACCTCCTCCGAAGTTT
ATTAATGGAGAAGAATATCACTTTGTGCCTGGTCTGGGTTACTATCCCGTGGCCCGAATT
CCTGCTCTTCGTCAGCATCAACAGCAGGTTCAACAGGCGCAGACCCTGACCCTGACCCAG
GAAGAGCCTTCTGTGGTATTGCAAACACAAGCAGCCTCGAAACCTGCTCCTAGAGCTGCG
GTCAAGCCAGCACCTAAAACCACCAAGGTCGCCTCTAAGGCCGCTCCTCGTAAGCTGGAC
CCTACAGCACAGGCAGCAGGAGCAGTGACGGCCCAGGTGAGTGCCAAAAAACGCACGGTC
ACTGCTTCGGACATGCCCGAGGGCGACACCTCCATCCTGGAAAAGGTGGCAAGCAATCCA
GACGTAGCTGACATTATCCGTCAGACCTTTGCCCAGCTGGTGGACCAGAAAGAGCCACAG
GCCAAGGTGGCCTTTTCGGCGGCGCGACTGCTGCTGTCCGTGCCCGAAGCCGAGTGGGGC
AAGACCAAGCCCGATCTCATGGCTCTGTGTCTTTCCAATTGTTTCCGGGCCTTTTCCGGC
GATTACTACCACGATTTTTGGCGGGCCATGCGTCGATACACCAACTTCATTGTGCGTCTG
CGAGCGTGGATGGTCTTCAACGTCAACAAGCGATTCATTGACGAGTGTGGTTCGGCGCTC
GACTTTTTGGTGGTGATGCGATTGTCCCATGACACGCTTCTGCAGTTCAAGTTCGACAAG
GTTCTCAAGAAGATCATCAAGTTGGGATCCGAGAGCGTGAAGGACAAGTCCAACAAGATT
CTTGACCAGGCGGCAAAGGCCGTGAAGGCTGATGACTCATCCGCCAGCCCTGTGCCGACT
GAGTCGAAATCTTCGGCCGTGTCTTCTACTTCCAGCTCGTCAGCTGCGACCCCAGCAACT
GCGGCAGCCAAGGTCAAGAGCGGCAAGGTTGCCAAGCCGCTGGCCAAACCTGCTGCCAAA
CCTGCTGCTGGATCGTTCTTCAAGTCGCTGTCGAAGCCGGAGGCTGAGAAGAAGGCCATT
GATGTGGATAAGGTGGCGGACAAGAAGGTTGACAAGAAGCCCGAGGTGAAGTCCGAGACG
AAGTCCGAGCCAAAGCCCGAGCCCAAACCAGAGGTCAAACCCCCACAATCTGCGTTCAAC
GACGTCATGGCCAACATTCTGCGGGTTCCTACGAAGCGGGCTTCCCCCGCTGCGTCTGCG
CCTGTTGAGGCAAAGAAGCAAAAGGTTAAGAAGAAGGTGTCGTGGCGGCCGGACGAGGAG
CTGGTGGATATCCGCTTCTTTGAGTCCGAAAAGGACGAGAACCGCAACCACCACCTGTCC
TCGTATAGAGATATGGACAAGGAGGAGGGCCGAGGTCTGATTGGCAACAATAGCGAGGTG
GATATCGACTTTGACCCGGTGGAAGATGAACAGCAGGTGTGGTACGAGCCTGCCAAAATG
TCCTTCGAGGGCGTTACTGACGATATCGAGCCCAACCCGCCCAAGCGAGGCGGTCATGGC
GCGATTGAGTCTTCCGAAGCGGAACTCATGGCCCAGCGAAACAAAACGTCTCTGGCCACC
GTATATGGCCCCGATGATGACATTCCAGACAGTCCAGTCGAGCCGTCTGAGGCGTCGCAG
AACCCACTGGATCTACCAGACTCGCTGTTGAGCGAGCCCAAGGAGATGGTAGTGGCGGAA
CGGACCAAGAAGATGCTGAGCATCATGTCTGGCGCGTACCGTGTTGTGCCCAAGCAGGCA
TTTAAGGGTGACCCTACCAGTGAAAACGTGTGCGAGGCATACGATACGGTGTTTGTGGGC
GAGACTGCTACTGAGAAACCAGCCGAGCCGATTCCTGACGTGCCAGCGTTTGATATTTCC
AAACTTCCCGGTTTTGCGTCTGTCAGTGGCTCTGAGCAGAAGCAGAGCACCCCTCCACCG
CCTCCTCCGCCTGCGGCCAACCCCCTGGCGGCTTTGGCGTCGCTGCCTGGACTGCAGAAC
CTCATTCCAGCGCTCCAGGCTGCGGCCAACCCCGGTGCTGCTGCAGTAGGCATGCCTCCC
ATTCCGGGACTTCCTCCGGGAGTAGATCCCATGGCGTTTGTGCAGGCTCTGGCTCAGATG
CAGCAGCAGAACCAACAACAACAGCAGCAACAGCAGCAACAACAGCATCCCCAGCAACAA
CAGCAACAACAGCATCGGTACGATCGAAACGATAGATACGACCGCAACGACAGACATGAC
CGGCACGATCGGGGTAATGTGAGTGAGATGCGGAAACGCGATGTTCGACCGGACATTTCC
AGATCATGGGATAAGCTCCCGGCCAACAGGTACTCGCAACCGTGCAGGTTCTTCAATACG
GATAAGGCGTGCTCCAGAGGAGACCAGTGTATTTTTTTGCATCTCCCTAAATAATTTGTG
GAACTGGGCACAACGATGGAGCAAGTTTCACCAAACGGTGAGTCAAGGACTTCTACAGAA
CGGAGCAAGAACTTTAACAACTCGACGGAGCCAGCATTTTTGTATTCTAGTAGCTGCTTC
AGAAACCTCTGTTCTGTCTAGTGAGCACTACCACATGGCCCACCGTTGGCATGTACCACC
ATAATATATATTCGGCGAGCTGGTTTCAGTGAGCTGTAGCAGTAAGTCACG

Legend

Locus sequence
Up/downstream sequence

Edit sequence

Translation(s)

YALI0F08811g_CDS-001

Protein length: 1022 aa.
Product: Conserved hypothetical protein

>YALI0F08811g_CDS-001 MAESTQTFYPASSSSSDMPPPQYDYNNVAPPTFFYDKGDSFNVSGESPSLAYNQGPEFAP
QFAPQDVYTDPSQDYSWMETQHLGQQHLGQQDQQQHLGQQHLGQHLGQHLGQHLGQQPQG
QQPQGQQPQGQQPQGQQPQGQQPQGQQHQGHTFLDPQFQQYNQFQEYDQTHPQTRALPPQ
SQHSVSPMPTSHSNSPVSTASPVPQTQAPPPPVQTPSAGPPPKFINGEEYHFVPGLGYYP
VARIPALRQHQQQVQQAQTLTLTQEEPSVVLQTQAASKPAPRAAVKPAPKTTKVASKAAP
RKLDPTAQAAGAVTAQVSAKKRTVTASDMPEGDTSILEKVASNPDVADIIRQTFAQLVDQ
KEPQAKVAFSAARLLLSVPEAEWGKTKPDLMALCLSNCFRAFSGDYYHDFWRAMRRYTNF
IVRLRAWMVFNVNKRFIDECGSALDFLVVMRLSHDTLLQFKFDKVLKKIIKLGSESVKDK
SNKILDQAAKAVKADDSSASPVPTESKSSAVSSTSSSSAATPATAAAKVKSGKVAKPLAK
PAAKPAAGSFFKSLSKPEAEKKAIDVDKVADKKVDKKPEVKSETKSEPKPEPKPEVKPPQ
SAFNDVMANILRVPTKRASPAASAPVEAKKQKVKKKVSWRPDEELVDIRFFESEKDENRN
HHLSSYRDMDKEEGRGLIGNNSEVDIDFDPVEDEQQVWYEPAKMSFEGVTDDIEPNPPKR
GGHGAIESSEAELMAQRNKTSLATVYGPDDDIPDSPVEPSEASQNPLDLPDSLLSEPKEM
VVAERTKKMLSIMSGAYRVVPKQAFKGDPTSENVCEAYDTVFVGETATEKPAEPIPDVPA
FDISKLPGFASVSGSEQKQSTPPPPPPPAANPLAALASLPGLQNLIPALQAAANPGAAAV
GMPPIPGLPPGVDPMAFVQALAQMQQQNQQQQQQQQQQQHPQQQQQQQHRYDRNDRYDRN
DRHDRHDRGNVSEMRKRDVRPDISRSWDKLPANRYSQPCRFFNTDKACSRGDQCIFLHLP
K*

Neighborhood

Browse the locus neighborhood with JBrowse:

References

There are no reference.

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