YALI0F07216g

Overview

Description similar to uniprot|P08640 Saccharomyces cerevisiae YIR019c STA1 extracellular alpha-1, 4-glucan glucosidase, hypothetical strart
Locus type CDS
Locus tag YALI0F07216g

Location

Species Yarrowia lipolytica Positions 1058396..1060263
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1868 (nuc.)
Previous locus YALI0F07200r Next locus YALI0F07238g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F07216g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F07216gYALI0F07216g_mRNA-001YALI0F07216g_CDS-001

Nucleotide sequence

 

>YALI0F07216g
ATGAAATTCTTCTCCATTGCTCTGTTATCCGCCATGGCTGCCGCCGCCCCCATTGCAGGT
GCTCCTGCCGAGTATCCTGTATACAAGGACCCCGAACTCTACCGAACGGTCACCGTGACC
GTTGAGGGAGACTACTGCGAGGCCACTTATGCCCCCTCTGCAGCCTTCCCTGCCGCTTCT
TCCGCTTACTCTGTCGTCAACATTGATGGCTCTGGCAACGGAAAGCAGACCGAGGGCGCT
GCTTCTCAGGGCGCTCAGCCTACCGGTACTGCTGGCTCTGAGGCTTCCTCTGAGTCTGCC
TCTGAGTCCAAGCCCTCTGCCAATTCTCAGGGCCAGAACTCTCAGGCTCAGGCTTCTGTT
TCTTCTGAGAAGGCCCAAGGTTCTGCCCAAGGTACTGCCCAGGGCTCTGCCCAGCCCACC
AACGCGGTTAACTCTCAGTCCAACGCTGCTGTCTCCTCCCCCAAGAAGACCGAAGCTGCC
AACTCAGGTGCCCAGAACTCTGTTCCCAATGGCCAGGCTTCCTCCACTCCCATCTACACC
TCTGCCTCTGCTGATGGTGCTTCTGTTCAGGGTACAATCTCTCCATCTTCCTCCCAGAAG
GAGAACCCCGCCGAGAACTCTGCTTCTTCTGCTGCTGCTCCTGTTGCTTCTCCCTCTTCC
ACTGAGTCAGACGAGTACGTGTACGAGACTGTAACCGAGGACCGAACCTCCACTGCTCCC
ACTCCCGTAGTTACCGTGGTTGTCAACCCCACTGGAACTGTCACCAATGTGCACACCAGA
GTGTCCACCTTCACCACTGACGGCCAGACCTTCACCACCACGTTCTACGACCAGGCCAAC
GCCACCACCACCGAGTTCTCCACCTTTGTGCCTGTGGTCACCACCTCCGTGCCCTTCAGC
AACTCTTCTGCTGCTGCTGCTGCCCCCACTTCCGAGCCTCTCTTCAGCAACACCACCACT
CCCGTCGTTGAGCCCTCTACCAGTGCTCCCTTCACCAACACCTCTTCCCCCGTGACCGCC
GCTGGTACCTCTTCTGTTGTTCCCACTTCGTCTTTTGTGAACTCCACTACCCCCGTGACC
TCTGAGCCCACCTCTGCTCCTTCCGTTGTGCCCACCTCTTCGTTCGTGAACAGCACCACC
CCTCTTCCCACCTCAGAGCAGCCCTCCACCTCTTCCGTTGAACCCACTTCTTCGTTTGTG
AACAGCACCACCCCCATCCCCACCTCTGATCAGCCCTCAACCTCTTCAGTTGAGCCCACC
ACTTCGATCCCCACCTCGTCGTTCGTGAACTCTACCACTGAGGCTCCCGCTACTCAGCCC
ACCACCTCGGAGACTTCTTCCATCCCCACCTCGTCGTTCGTCAACACCACTGCTCCCGGA
ACCACTTTCTTGACCCCCAACCCCACTAGAATGCCCGGTCTGCAGGCCCTTGACGCTGCC
GCCGGTGAGAGCCTCGAAGAGTCTTCTACGGTTGAAACTTCCACCAGTGCTTCTGCTTCC
TCCAGTGACCCCACTGTGACCTCTTCTGCTATTGAGACTTCTTCCAGCTCTTCCAGCTCG
TCTTACTCCACTAGCACCATCACTAGCACTGTGACTGCTGACCCCAGTGCTACCACCTCC
CCCGCCACCTCGTCATCGGCTTCTTTCGACATCGAGGCCTACTCGGTCTGCCCCTGGTAC
TCGGAGATGGTGAGCGACGACGGCCTTCTGTCCGCAACCTCAACATCCACCTCCTACGTC
ACCTCTACCCAGACCATCACTTCCACTCTGGTGAGACCCTCTGCCACCGCTTCCGCATAG
ACGGCAGAGGCTTTAGATTTCTTGTAGTTTATTTGTAATTTATATAATGATTGATGTTTT
GTCTGATA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F07216g_CDS-001

Protein length: 600 aa.
Product: GPI-anchored cell surface glycoprotein (flocculin), putative

>YALI0F07216g_CDS-001 MKFFSIALLSAMAAAAPIAGAPAEYPVYKDPELYRTVTVTVEGDYCEATYAPSAAFPAAS
SAYSVVNIDGSGNGKQTEGAASQGAQPTGTAGSEASSESASESKPSANSQGQNSQAQASV
SSEKAQGSAQGTAQGSAQPTNAVNSQSNAAVSSPKKTEAANSGAQNSVPNGQASSTPIYT
SASADGASVQGTISPSSSQKENPAENSASSAAAPVASPSSTESDEYVYETVTEDRTSTAP
TPVVTVVVNPTGTVTNVHTRVSTFTTDGQTFTTTFYDQANATTTEFSTFVPVVTTSVPFS
NSSAAAAAPTSEPLFSNTTTPVVEPSTSAPFTNTSSPVTAAGTSSVVPTSSFVNSTTPVT
SEPTSAPSVVPTSSFVNSTTPLPTSEQPSTSSVEPTSSFVNSTTPIPTSDQPSTSSVEPT
TSIPTSSFVNSTTEAPATQPTTSETSSIPTSSFVNTTAPGTTFLTPNPTRMPGLQALDAA
AGESLEESSTVETSTSASASSSDPTVTSSAIETSSSSSSSSYSTSTITSTVTADPSATTS
PATSSSASFDIEAYSVCPWYSEMVSDDGLLSATSTSTSYVTSTQTITSTLVRPSATASA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG