YALI0F06358g

Overview

Description similar to uniprot|P25641 Saccharomyces cerevisiae YCR068w CVT17, conserved hypothetical protein
Locus type CDS
Locus tag YALI0F06358g

Location

Species Yarrowia lipolytica Positions 941300..943197
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1898 (nuc.)
Previous locus YALI0F06336g Next locus YALI0F06372g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F06358g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F06358gYALI0F06358g_mRNA-001YALI0F06358g_CDS-001

Nucleotide sequence

 

>YALI0F06358g
ATGAAACAAGATCTGTACAAGGAATCTTCTCCACCGCCTTCCACGACCAAATCAAAAGGC
CTGTATGTGATTGTGGCCGCTCTCGTCACTACAGCCATCTACCTGTTGTACTCCCAGGGT
TACTCAAACACACATGGGGAGAAAGATATGCCTAGTGTCGTGCCCAATCTGGTACTCCCC
GCTAACCCCTCAAGTGACCACTCATTTGCGGTAAAACACATCTATCACCACAACACCGAG
GCCGACGCCAACCACGGACGCATGGACGTGTCTGGAGAGTGGGTTCGGGCCGCCCAGAAG
GCTCAGCATCTCAACCTGGGCCAGGACACCCACCGCTACATGGCCTCAAACGCCAGAGAC
CCCTACACCAATCTGCCGCTCAAGTCGCGGACCCAGAAGGTGAAGCGATGGCGGCAGCGC
GACCCAGATCACGTGGAATCTTACCTCGAAGCTGCGCGTCTCAACCCTCAGCTTTACGGC
GCCATGGACTTTGACTGGGTAGAGGAGGACATTCTGGTGCCGGATGTCACCGACAGAGAT
ACAGTCGTGTCGCTGGCCGTCATGGCGTCCAACGCGTACGTTGACGTGCCATTTACAGGT
GACTGGACCAACGTGAGTTGGAAAGAAACTGGAGGCATTGGCTGGCAGAGTGATGGAGTG
AGAGGTCACATTTTCGTGGACCAGACGCCCGGCTCGCCTCTTGTTGTTATTGCTCTTAAG
GGCACATCGGCGGCCATTTTCGACTCTGGAGGAGACACCGTCATCAACGACAAGACGAAC
GACAACCTGTTGTTCTCGTGTTGTTGTGCGCGTGTCTCGTACTTGTGGAACACAGTGTGT
GACTGCTACACCGGCGAGTCGTACACGTGTGACCAAGAGTGTCTAGAGAAGGAGCTTTAT
GCCGAGGACCGGTACTATCGAGCCGTTCTCGACATTTACCGCAATGTAACTCATCTGTAC
CCTCAGAAACAAATCTGGGTCACCGGACATTCCCTGGGAGGCGCTCTGAGTGCAATGTTG
GGTCGTACCTATGGTATTCCTGCCGTTGGTTACGAGGCACCCGGAGAGCTGCTTCCCACC
AAGCGACTGCATTTGCCCAGTCCTCCTGGTATTCCCTGGTCCCAGGAACACATCTGGCAC
TTTGGACACACGGCTGACCCCATCTTTATGGGCGTGTGTAACGGAGCATCGTCATCCTGT
TCCATTGGAGGCTACGCCATGGAGACGTCTTGCCACTCGGGTCTCCAATGCATGTACGAC
GTGGTGACCGATAAAGGATGGCATCTGAGCATGGTCAACCACAGGATTCATACGGTGATT
GACGAGGTGCTGCTAGCGTACAACGAAACAGCTGCATGCGTTCCTCCTCCCCCTTGTCAA
GACTGTTTCAACTGGAACTTCGTGATGGGTAATGACAAGGACGACGACGATAAGGATAAG
AAGAAGAAGAAGAAGACGAGCACGAGTAGTAGTGTGGTGTCCAAGACTAAGACATCGACC
TCTTCTACCGTTGCTACTAACACGATGCCTTCGCTTCCTGATCCTACTTGTGTGGAGAGA
AACTGGTATGGCAAGTGTATCCGGTATGATCCGGAGATTAAGCAGCAGTATGGTGATAGC
CATACCGTGACCCATGTTACTATGGCTTAGCGTGCGTTTTCGTGTCACTCGCACGTGGCT
GTGCTGGCTGCTTCGCCTGCCTTATCTTTGAATGCTTCTCGTTTTAGCATGTGGCACGGC
ACTAGTTTAGCGTCATGCATTAGCCACTGTGGCGACGGTGGAGAAGCACAAAACAGGGCA
CGGCGGTCAGGGGACGACGGTCACTTGTGCCTGGCATGGGGATATATTTATAATGTATTT
ATTGGAATAAGTGGTTGTGGGGTGTGCCCAACCATGTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F06358g_CDS-001

Protein length: 550 aa.
Product: Lipase required for intravacuolar lysis of autophagic and Cvt bodies, putative

>YALI0F06358g_CDS-001 MKQDLYKESSPPPSTTKSKGLYVIVAALVTTAIYLLYSQGYSNTHGEKDMPSVVPNLVLP
ANPSSDHSFAVKHIYHHNTEADANHGRMDVSGEWVRAAQKAQHLNLGQDTHRYMASNARD
PYTNLPLKSRTQKVKRWRQRDPDHVESYLEAARLNPQLYGAMDFDWVEEDILVPDVTDRD
TVVSLAVMASNAYVDVPFTGDWTNVSWKETGGIGWQSDGVRGHIFVDQTPGSPLVVIALK
GTSAAIFDSGGDTVINDKTNDNLLFSCCCARVSYLWNTVCDCYTGESYTCDQECLEKELY
AEDRYYRAVLDIYRNVTHLYPQKQIWVTGHSLGGALSAMLGRTYGIPAVGYEAPGELLPT
KRLHLPSPPGIPWSQEHIWHFGHTADPIFMGVCNGASSSCSIGGYAMETSCHSGLQCMYD
VVTDKGWHLSMVNHRIHTVIDEVLLAYNETAACVPPPPCQDCFNWNFVMGNDKDDDDKDK
KKKKKTSTSSSVVSKTKTSTSSTVATNTMPSLPDPTCVERNWYGKCIRYDPEIKQQYGDS
HTVTHVTMA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG