YALI0F05852g

Overview

Description some similarities with uniprot|Q98S43 Guillardia theta AMP-activated protein kinase, beta 2 non-catalytic SU and other 5'-AMP-activated protein kinases, beta subunits
Locus type CDS
Locus tag YALI0F05852g

Location

Species Yarrowia lipolytica Positions 866479..868249
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1771 (nuc.)
Previous locus YALI0F05830g Next locus YALI0F05874g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F05852g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F05852gYALI0F05852g_mRNA-001YALI0F05852g_CDS-001

Nucleotide sequence

 

>YALI0F05852g
ATGGTCGAGTACACTTTTGAATGGCCGTATGGCGGCTCGGAGGTGGTTGTTTCTGGCACC
TTTGACAACTGGTCCAAGTCCGTCAAGCTGGACAAGACCCCCAAGGGGTTTGCCAAAACC
GTCAAGTTGCCCAAGGAGAAGACGGTGTACAAGTTCTACGTGGACGGAGTCTGGAAGGTC
GATGACGGCGTTCCCACCGAGAAAGATCCCCAGGGGAATCTCAACAACGTGCTCATTTTT
GCCGAGGGCGACCTGGACAATCACACCCAGAACATTCCCGGAGCTTTCCCCGGAGCAGCC
GACGAAAAGGTCACCCATGATCTTAAACCGTCGCATCTGGACCCCAAGGCTGCCCATAAG
CTGGACGAGACTCTGGAGACCAAGCGAGAGGCGGTAGCGGGAGGTCTGGTGGATCCGATT
GCAGCCACAGACTCGTCTGTGCCCCAGGGACTTGTTTCTGGCCACCACAACAAGACCTCC
AAGCACGCTGACCACGATCTCAAGCCGTCACATCTCTCCAACCGAGATGCTACCAAGTTG
GAAGACACTCTCGAGGCCAAACACGAGGCTGTTCAGGGCGGCCTGGTGGACCCCCAGGAT
GCCTACGGACAGGGTCACGTGGACAAGAGTGGTTTGGCCCACAATGCTCCGCCTACTCTG
GAGTCAATCCAACGGGACGAGAAGGCCGAATTCACCTCTGCCACCATTCCTGCCGCTTCC
ACCACCTCCCAGAATCAGCCCGTCACCCACGATCTGCTTCCCTCTCATCTGACCCACAAG
CAGGCCGACAAGATTGAAAACGTGCTGGACGTGAAACAGCAGGCGGTGGACAACGGTCTG
GTCGATCCCATTGATGCCACGGGTCAGTCACGAGCCGTTCCTTCTCGAGATGTGACTTCT
TCTCAGACCTCCCATGCTCCTCCCTTGAGCAAGTTCCAGAATGACGAGAAGGACGAGTAC
ACCACCGCCACCATTCCGGCAGCTTCCACCTCCCACAAGGAGCGCGTCACCCATGACCTG
CGGCCCTCTCATCTGAGCCATGCTGCCGAGAACAAACTGGAGCATACTCTGGAAACCAAG
AAGGAGGCTGTTTCGGGAGGTTCTGTGGTGCCCACTTATGCGGAAAACCCCATCCCCGCA
GCCTCCACCACTTCCCAGAACCAGCCTAGACAACATGATCTGCAGCCCTCGCATCTTAGC
AACAAGGCCTACGATAAGTTGAACTCTGCTGTCGAGCGAAAGCACGATATTATTGAGGAC
GGCAAGGTGTCTCCTGTCGATTCCCATGGTCATTCTCGAGCCGTTCCTTCCCAGCCATTG
GCCAATTCCACCTCCAAGCATGGTACTCGTTCTTCTGGCACCTCTGGCGCTTCTTTGAAC
CCCTTCCAACAAGACGAAAAGAAGGAGTTCACCAGCGCCACGATCCCTGCCGCGTCCACC
TCCCACAAGGAGCCCATCACCCACGATCTGCAGCCTTCTCATCTCAGCAGCAAGGCCGAA
CGGACTCTGGACGGCGTGCTCGAGACCAAGAAGGAGGCGGTTGAGGGCGGATCAGTTGTG
CCCACCTACTCCGAGAACCCGATTCCCGCCGCGTCCACCACCTCCCAGAAGCAGCAGCGA
ACCCACGATCTACAGCCCTCCCATATCGGCAACAAGGCCGAGCACAAGCTGGACGACAAT
CTAGCCTTTAAGCAGAATGTCGTCAACTCCGGCAGAGTCGATCCTGACAAGTTGTAGGTT
GATCAGCAAATATATGAATAGTAACGATGTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F05852g_CDS-001

Protein length: 579 aa.
Product: Conserved hypothetical protein

>YALI0F05852g_CDS-001 MVEYTFEWPYGGSEVVVSGTFDNWSKSVKLDKTPKGFAKTVKLPKEKTVYKFYVDGVWKV
DDGVPTEKDPQGNLNNVLIFAEGDLDNHTQNIPGAFPGAADEKVTHDLKPSHLDPKAAHK
LDETLETKREAVAGGLVDPIAATDSSVPQGLVSGHHNKTSKHADHDLKPSHLSNRDATKL
EDTLEAKHEAVQGGLVDPQDAYGQGHVDKSGLAHNAPPTLESIQRDEKAEFTSATIPAAS
TTSQNQPVTHDLLPSHLTHKQADKIENVLDVKQQAVDNGLVDPIDATGQSRAVPSRDVTS
SQTSHAPPLSKFQNDEKDEYTTATIPAASTSHKERVTHDLRPSHLSHAAENKLEHTLETK
KEAVSGGSVVPTYAENPIPAASTTSQNQPRQHDLQPSHLSNKAYDKLNSAVERKHDIIED
GKVSPVDSHGHSRAVPSQPLANSTSKHGTRSSGTSGASLNPFQQDEKKEFTSATIPAAST
SHKEPITHDLQPSHLSSKAERTLDGVLETKKEAVEGGSVVPTYSENPIPAASTTSQKQQR
THDLQPSHIGNKAEHKLDDNLAFKQNVVNSGRVDPDKL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG