YALI0F05170g

Overview

Description some similarities with uniprot|P40546 Saccharomyces cerevisiae YIL019w
Locus type CDS
Locus tag YALI0F05170g

Location

Species Yarrowia lipolytica Positions 780580..781880
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1301 (nuc.)
Previous locus YALI0F05148g Next locus YALI0F05192g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F05170g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F05170gYALI0F05170g_mRNA-001YALI0F05170g_CDS-001

Nucleotide sequence

 

>YALI0F05170g
ATGCTAGGAGGATTCAACCCGTTTGATCTGGGCGATCTGGCCCAGGGGACCAAGAAGGCG
GCCCCCGCGAAGAAACCAGTGCCTGCTGAGCAAGCCCAACCTGCTAAACCTGCCCAGAAG
AAGCTCGAGGAGAAGCCCAAGGAGAAGGAAGTGAAGAAGGAAGATACCAAAAAGGAGGCT
GTTGAGGAGGCCAAGAAGACAGTCAAGACTAAAACAAGCAAATCTAAACCCGTTAAACCG
ACAAATACTTCCAGAAAGGTCTCGAAACCCGCAAAAACCTCCAAGGAAGACGCCGAGAAG
GAGTACCACAGAAAAATGAGACTAGCATTTGAGGCCCAGTTTGGACATGTTGAGGGGCTA
AAGGAGGACGACAAAGAGGATGAAGATTCTGAGTCTGAGTCGGATGATAACAATGATGAC
TTTGACGACAACGAGGATCTCGTCGAGCTCTCCAAGACTTATGTGGAGCGGCCATCAGAC
GATGAGATGGACACCGAGAGCGAGAAAGAGGAGGAGGAAGAAACGAAGAAAGAAGAAGGA
CCTGTGATTGTCCGGTTCACTGGAAGCGACCGTTCTACGAGGGACTTCAACGAAAAAGCC
GAGAAGAAACGGTTCATGAGCAAGAAGACACCGTTGTCTGAGGTCCAGAAGGAGGAGAAG
GAGAAGCTACTCAGTGAGACTCAAAGACGAGTGCCCAAGACCAAGGAGGAAGAGGAGGAG
GAGAAGGAGGACCTGCAGAATGACGTGGCTCTGCAACGACTTATCAACGAGTCTTCGATT
TTGCATTCTCAGGCTGCTCAGTCTAGCTTCTCTGGAGCAGATATTTCCTTCCTGGACGAT
GGTCCCATTGGTAAGGCTCGTCTTAAGACCCTGACGTCTCGAATTGAGAGTCTGGGAGGC
AAACATATCCCGCTCCAGAAGAACATGCCAATGTTGACTCGAAAAATGGTCAACTCCAAG
TTCCAGAACAAGGTCAAGGCCGAGCAAGAGCATGCCCAGGAGGCCGGTATTATTCTGGCT
AAGACGGCTCCGGTGGACAACCGGTTTGCCATTCGAAAGAAGAAGGTTGTCAAGCGAGAC
CGAGGTCTGAAAATCAACTCGGTTGGTAAGAGCACCGCTGGAGGAATCAAGTTGTCTAAA
CACGAGATTCGCAAGTTTGGAGGTAAGATCTAGGACACCGGAAGAATGACTAGGAGACTA
GTCCAGGACACAGATACAGGAGTCACGTGAACGTTTAAATGGCACCGGGAGGTGATGACA
AAAAAAGCACGCATAGCATTAATATACAGGTTGGATGAATG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F05170g_CDS-001

Protein length: 391 aa.
Product: Conserved hypothetical protein

>YALI0F05170g_CDS-001 MLGGFNPFDLGDLAQGTKKAAPAKKPVPAEQAQPAKPAQKKLEEKPKEKEVKKEDTKKEA
VEEAKKTVKTKTSKSKPVKPTNTSRKVSKPAKTSKEDAEKEYHRKMRLAFEAQFGHVEGL
KEDDKEDEDSESESDDNNDDFDDNEDLVELSKTYVERPSDDEMDTESEKEEEEETKKEEG
PVIVRFTGSDRSTRDFNEKAEKKRFMSKKTPLSEVQKEEKEKLLSETQRRVPKTKEEEEE
EKEDLQNDVALQRLINESSILHSQAAQSSFSGADISFLDDGPIGKARLKTLTSRIESLGG
KHIPLQKNMPMLTRKMVNSKFQNKVKAEQEHAQEAGIILAKTAPVDNRFAIRKKKVVKRD
RGLKINSVGKSTAGGIKLSKHEIRKFGGKI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG