YALI0F05148g

Overview

Description weakly similar to uniprot|Q9P6D7 Neurospora crassa NCU01763.1 hypothetical protein
Locus type CDS
Locus tag YALI0F05148g

Location

Species Yarrowia lipolytica Positions 778195..779964
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1770 (nuc.)
Previous locus YALI0F05126g Next locus YALI0F05170g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F05148g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F05148gYALI0F05148g_mRNA-001YALI0F05148g_CDS-001

Nucleotide sequence

 

>YALI0F05148g
ATGAGTGACTCCATTGGTGAGTAGGGGAACGACGGGAGAGGACACGTGGCAACAACTGAA
CCGCGGAAATGGACCTGCTTGTGTCACCAGTACTCGTGTCAGTAGTGCGAGGTGTGGGGT
CCGAGATCACAGAGACGGGCAGACACAAGCAGAAGAACACCAAGAGGAGCCGTCCAACAG
GCAACCAACTACGCACACAAACAGCCCCAACGGATTGGCACACGTGAGATTTTCACGGCT
CAGCTACATTAATGTCTCAATCGGCTTGGTGGCGAGTTGGACAGATACAGACATTACAGA
GACAGGGACGGTGTGACGGCAAGGGCCGTGGCAGGGATTCCATATAAAGAAGACCGTACC
ACCCTGTCGCACCGACCGGATGTGTCCAAGGAAACTGCCCCTTACTTTCATGCTGCTACC
ATGCTCCGGACGTTTGCCGTAGATACTGTCGTGTGCTAGAGCGGCACTAAGGCTTGCTAG
TGTCTGTTGCCGCTGAATGGACTCGCTAGGACCTACGCTCTCGTTACTCCTGTTCGAGAT
TGGTTGCTACATTGCTGGAAGTGACTGTTGGTGGTCTGTGCACACTCGCTCCTGTCTGGC
CCAGCAGTTCTCATACAGTCTTTTTGACAGCTGGTCACCAACACCCCCATTATACTAACT
CAGACCGGGTATTTGTCCGTGCTATCAACACAATCCGGACACTCTCCTCACGGCCAGGAT
ACTCCTCGCGACCCCGCCCCCCTATCGAGTCGCGCATCCAGCTCTATGGAATGTACAAGC
AGGCCACCGAGGGCGACGTGATGGGTGTCATGGCCCGTCCGGTTGGAGATTCGGAGATTG
ATGTGGCTGGCCAGAAGAAGTGGGACGCCTGGAAACAGCAGCAGGGGCTGTCCAAGACCG
AAGCCAAGCGCAGATACGTGTCGTTCCTCATCTCCCTGATGAACACGTACGCCTCAGATA
CTCACGAGGGGCGCGAGCTGCTGGCGGAGCTGGAGTACATGTGGGATCAGATCAAGGACG
TCGCGTCGGACTCTGAGGGCGCCGAGGAGGAGCTTTACGAGGACGCTGTCGAGTATCCCT
CTCGATCGGCTCTGGGACGGGCCGAAGTTGGCACTTCTCCCAGTCACGTGAGCCATGGCA
GTGGAGGTGGCGCCCATGGTAGTGGGGTGGGCGGATCAAGCCGAGCACAGCAGGGGTCCA
ACCTGACGCATGGCTCAGGCAACTCGCGATCACACCATACTGCCATTGCGCCGCATCCAC
AGAGCAATCTGGTCCAGAGCCAGAGCCAACATCAGCATCAGCAGCATACTCCTCCGATTC
CGTCGGACAGGTTCAAGAGCGACATGGCCTGGGCTCTGCGAACCATCAACGAGGAGATGG
CAGACATGGCGAAGCAGTACCGGCCAGCGGATCCGTCCGAACCGCGCCGAAACTGGAGGC
GGCGAGTCCTGTTGCTCTTGCGGGCAATAGGTGTGCATGTGGGTATTGATATGGTGCTGT
TTGCTATTCTTGCAGCTATTTTGAAGGCCCGACGAGGCGGTAAGGGGCCTGCGGTTTCAC
GGGGAGTGGTTTCTCCCGTGCACACTTTCCCTACCAGAGTGCTATCTCTTGCATCTCTTG
GAGATCACATTTCGTATCATATCATTCAGATGGCCGACGGCGTGTATGGATATGCCGTTG
CCTGGGTTAGCATGTCGTAGGAGGAAGAGGTGGAGGATCAGGTAAATGATTAGGGAAAGG
GTATATAGGTTGAATACTGACGATAACGTC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F05148g_CDS-001

Protein length: 351 aa.
Product: Conserved hypothetical protein

>YALI0F05148g_CDS-001 MSDSIDRVFVRAINTIRTLSSRPGYSSRPRPPIESRIQLYGMYKQATEGDVMGVMARPVG
DSEIDVAGQKKWDAWKQQQGLSKTEAKRRYVSFLISLMNTYASDTHEGRELLAELEYMWD
QIKDVASDSEGAEEELYEDAVEYPSRSALGRAEVGTSPSHVSHGSGGGAHGSGVGGSSRA
QQGSNLTHGSGNSRSHHTAIAPHPQSNLVQSQSQHQHQQHTPPIPSDRFKSDMAWALRTI
NEEMADMAKQYRPADPSEPRRNWRRRVLLLLRAIGVHVGIDMVLFAILAAILKARRGGKG
PAVSRGVVSPVHTFPTRVLSLASLGDHISYHIIQMADGVYGYAVAWVSMS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG