YALI0F04818g

Overview

Description similar to uniprot|P30665 Saccharomyces cerevisiae YPR019w CDC54 member of the CDC46P/MCM2P/MCM3P family
Locus type CDS
Locus tag YALI0F04818g

Location

Species Yarrowia lipolytica Positions 742913..745899
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 2987 (nuc.)
Previous locus YALI0F04796g Next locus YALI0F04840r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F04818g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F04818gYALI0F04818g_mRNA-001YALI0F04818g_CDS-001

Nucleotide sequence

 

>YALI0F04818g
ATGTCCACACCCAGCTCCCCAATCGGACTGGGATCGTCCCCCCAGCGGGACAACAACGTG
TCGTCGTCGCCCCTGTTTATGGGCTCGTCGAATCCCCCCAGCGAGCTCGGCATGGCTTCG
TCGCCGGCCATGATGCCGTCTTCCGGCGGCACCCGACGACTTCCCTCGTCCACCGGAGCT
CGTCAGGGTGGCGCTCCTTCGTCCAGAGGAGCCGCTCTTCTGTCTGATCTCGACTCCACC
CCAACTCGCGCCACCGCCGGCGGTCGTCAGCCCCGAGGCGACATTTTCTCGTCCGACATC
AACACGCCACGTCGACAAACGACCTTTGGAAACGGCTTCGAAAGCTCGCCAATGCGCCTG
GACTCTGAGGGACTGTCGTCCACGGGTCTCGGGCTCCAGAGCGACAACGACATCTCCACC
GCGGGCCTCATGCCTTCCGAGGGGATCTCCACAGACGGAAACGAGCCGCGAGCGGTACTT
TGGGGCACAGACATCGCCATTCCAGAGGTGATGGCCAAGTTTCGACGGTTCCTGATGCAC
TTCAAACCGAGCTACCGGGTGCAACTAGATGGCACGGTGTTGGAAGACATTGGAGCCACT
GGACAACACACAAACTCGGACCCTGACAGACTGTACTACGTGATCATGCTGCAGCAGATG
CACGAACTGGGCATGACCAACCTGAACCTGGACATGCAGAACCTGCTGGCGTATCCTCCG
ACGGCGTCTCTCTACCGAAAGCTGGTGCTCTACCCCCAAGAAATCATCCCTCTGATGGAC
CAGACCATCAAGGACGTCATGGTCGCTCTCCTGGTCGAGGGAAGTGATCACCCGGAGGAG
TCGGTAATCCAGGAGGTGGAACAGACAATGTACAAGGTGCGTCCGTATGGCCTGGGCACA
GATCGAGGCATGAGAGAGCTCAATCCTTCAGACATTGACAATCTTGTGTGCGTCAAGGGA
CTGTCTTTGAGATCAACGCAGGTCATTCCTGACATGAAGGAGGCGGTTTTCAAGTGCTCG
GTGTGCAACCACACCGAACCGGTCCAAATCGAAAGAGGTATTATCGCCGAACCTGTCGTT
TGTCCTCGAACTGTGTGCCAGAGTAAGTACTCCATGCAAATTCTGCACAACCGGTCCATT
TTCGGCGACAAACAGGTTGTGCGACTCCAAGAGACACCGGACGTTGTTCCCGACGGCCAG
ACGCCCCACACGGTGTCTCTCTGTGTCTATGACGAGCTTGTGGACGCCTGCAAGGCCGGA
GATCGGGTCCAGGTGACGGGTATTTACCGATCTGTACCTACGCGAGTGAATCCCCGAAAC
AGAACCATCAGATCGCTGTTCAAGACCTACATTGACGTTGTTCACGTGCAAAAGACCGAC
AAGACTCGTGTCCAGGTTGATACCGACATATCTGGAGCCAACAACGAGGACGCGGCTGAG
AAGAATGACGTGGAGGAGACGCGAAAAATCACCGTCGACGAAATGGACCGAATCAAGGAG
GTGTCTGAACGAGCCGATCTCTACGACCTCATGTCCCGGTCTCTGGCTCCGTCCATCTAC
GAACACGACGACGTTAAGAAGGGTATCTTACTGCAGCTGTTTGGAGGCACAAACAAGACG
TTCACCAAGGGAGGTGGACCCAAGTACCGAGGCGATATCAACGTTCTTCTGTGCGGAGAC
CCCTCCACATCGAAATCTCAGCTGCTTCAATATGTGCATAAGATTGCTCCGCGAGGAGTG
TACACTTCAGGCAAGGGCTCTTCGGCCGTGGGTCTGACAGCATATGTGGCACGCGATCCC
GATACTCGACAGCCCGTGCTTGAATCTGGCGCTCTGGTTCTTTCGGATGGCGGAGTTTGT
TGCATTGATGAGTTTGACAAGATGAGTGACGCCACCAGATCGGTGTTGCACGAAGTCATG
GAGCAGCAGACGGTGTCGATTGCCAAAGCCGGCATTATCACCACCTTGAACGCACGAACG
TCCATCATTGCCTCAGCCAACCCCATTGACTCTCGGTACAATCCCGATTTGCCCGTGACA
AAGAACATTGATCTTCCTCCTACACTTTTGTCTCGTTTTGATCTCGTCTATCTAATGCTT
GACCAAGTCGATGAACGAGTCGATCGTCATCTGGCTACTCATATCGCAAACATGTACCTT
GACGACAACACCGCCACTGCTGCCACTGGAGAGATCTTACCGGTGGAGTTTCTGACTCTG
TACCTGTCGTACGCACGAGCCAATGTCTTCCCTCAAATCACCCCCGACGCCAAAGACAGA
CTTGTGGCGGCATATGTGGACATGCGAAAGCAGGGAGATGATCCTCGGTCTTCGGAAAAA
CGAATCACAGCCACCACCAGACAGCTGGAGAGTATGATTCGGCTGTCAGAGGCACATGCC
AAGATGCGTCTTTCGTCCACAGTCGAGGTTTCTGACGTCGACGAAGCCGTGCGACTTATC
AGAGCCGCCATCAAGGATTACGCCACCGATCCTGTTTCTGGACGAATCGACATGGATCTG
ATTCAGACAGGAACTTCTCTGGCCCAGCGAACCGCGCAGGCCATGGTTTCTCAGGAGATT
GAGCGAGCTCTGGAGTCGTATCCCACCGGAGAAGCTCCTTACAATGAGGTGCAGCGCAAG
GTGTTGGATATCACGCGCGCGGTGACGAACGAGGAGTTTTCCCAGGTGGTCCAGGGAATG
CAGAATGAGAACAAGATTCGCGTCACCGGCGAGGGTCCTAGACGGCGACTCAGACTTTTG
GCGATGATGCAGTAAGAGATATACACAGGTGAATCACACATGGATAATTAATTAGGAAAA
TGAACAAAGTGAATGACAAACAACAAACCACTTGTTTCCATTCTCAGGGGCAAATTCACT
CGGCTGCCGAGACTCTCACGATGAGGCTCTCTGTTAGAGAGGAGAGTCTGGTTTATCGGA
ACGCCCCCAGCGAGTCATATGTAAGTCGTTAATGTATTTGTTGTGTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F04818g_CDS-001

Protein length: 925 aa.
Product: Essential helicase component of heterohexameric MCM2-7 complexes, putative

>YALI0F04818g_CDS-001 MSTPSSPIGLGSSPQRDNNVSSSPLFMGSSNPPSELGMASSPAMMPSSGGTRRLPSSTGA
RQGGAPSSRGAALLSDLDSTPTRATAGGRQPRGDIFSSDINTPRRQTTFGNGFESSPMRL
DSEGLSSTGLGLQSDNDISTAGLMPSEGISTDGNEPRAVLWGTDIAIPEVMAKFRRFLMH
FKPSYRVQLDGTVLEDIGATGQHTNSDPDRLYYVIMLQQMHELGMTNLNLDMQNLLAYPP
TASLYRKLVLYPQEIIPLMDQTIKDVMVALLVEGSDHPEESVIQEVEQTMYKVRPYGLGT
DRGMRELNPSDIDNLVCVKGLSLRSTQVIPDMKEAVFKCSVCNHTEPVQIERGIIAEPVV
CPRTVCQSKYSMQILHNRSIFGDKQVVRLQETPDVVPDGQTPHTVSLCVYDELVDACKAG
DRVQVTGIYRSVPTRVNPRNRTIRSLFKTYIDVVHVQKTDKTRVQVDTDISGANNEDAAE
KNDVEETRKITVDEMDRIKEVSERADLYDLMSRSLAPSIYEHDDVKKGILLQLFGGTNKT
FTKGGGPKYRGDINVLLCGDPSTSKSQLLQYVHKIAPRGVYTSGKGSSAVGLTAYVARDP
DTRQPVLESGALVLSDGGVCCIDEFDKMSDATRSVLHEVMEQQTVSIAKAGIITTLNART
SIIASANPIDSRYNPDLPVTKNIDLPPTLLSRFDLVYLMLDQVDERVDRHLATHIANMYL
DDNTATAATGEILPVEFLTLYLSYARANVFPQITPDAKDRLVAAYVDMRKQGDDPRSSEK
RITATTRQLESMIRLSEAHAKMRLSSTVEVSDVDEAVRLIRAAIKDYATDPVSGRIDMDL
IQTGTSLAQRTAQAMVSQEIERALESYPTGEAPYNEVQRKVLDITRAVTNEEFSQVVQGM
QNENKIRVTGEGPRRRLRLLAMMQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG