YALI0F04642g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0F04642g

Location

Species Yarrowia lipolytica Positions 713486..714499
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1014 (nuc.)
Previous locus YALI0F04620g Next locus YALI0F04664g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F04642g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F04642gYALI0F04642g_mRNA-001YALI0F04642g_CDS-001

Nucleotide sequence

 

>YALI0F04642g
ATGATGATACCCCATCGGGCTCGGAGTCCGATACTACCGCCAGAGATATGGCACATGATA
TACTGCTACTTGGACATTGACGATCTGGTGAACCTCGATTCTGTGAATCACCCGATCCGC
GCGGAGCCGGAATCGTTCTGGGAAGCCCTGCTGAAACGATTCTTCATAGTGAGCACCGTG
TGTCGCGGGACACGTGATCCCCGCCAGGTGTTCCTTGCGCTGGCGGATTTCCGGTTTTCG
AGGCTTTCTTGCGCTCCTCTGGTGTCGTCTCGAACGAGTTCGGTGTTTGAGTCTCAAGTG
GACCAGGTGCTGGTTCGATCTCCGTTTCTGGTCGACAGCAGCCATGGTCACGTGGCGGAG
GTGTGGGATTTTGCCCAAATGGCGAAATTCCGCTTCGATATGGACCCGAAACTGGCGGCC
TGTATCGGTGTGGATGGAAGTGGAGCGAGTCTGGAAAAGGGACAAGCCGGAGAATCGGTC
GTTATGCGGTACGATTACGAGGGACACGTGACTCACTCGTTTGCAATCCCCTTTGATTCC
TCCGAGTGCAACATTTTCTGCACCAACGACACCATTGACTGCACTTTTCTGGTCCAGGGG
CTCCACAAGTTTTACGTCAATTGGGCGGCGCGGGAGCTCAACGATGTCGGGTACATTTCT
GCAGCAGTCAATGTGGCCAATGGGCAGATTTTCTGTCTTCTGGGTCACTCGCTTGCTATC
TGCGACTTTGCCGGCAACTATACGCCTCTAGATGTTCACTTTAACCCCGATTTGAGATCT
CCAAGGTGGGTTCCCGGAGGAGGCAAGCGGTTTCTGGTCATCAGTCAGTCACGTGGATCC
ACCAGATTGTTGTATCTTGTGGACGCGGTCAATAGAACCTATGTTTCTTGGCCGGTGGAA
GGAGATAAGAGGGAGCCTGATGAGATTCAGGTGTTTGAAGATCAGGTGGTCATGTGGTAT
GTTGATAGGGAGAGGTGCTTGGAGGAGTTTTTGACCCCGTGGCAAGGCGAATAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F04642g_CDS-001

Protein length: 338 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0F04642g_CDS-001 MMIPHRARSPILPPEIWHMIYCYLDIDDLVNLDSVNHPIRAEPESFWEALLKRFFIVSTV
CRGTRDPRQVFLALADFRFSRLSCAPLVSSRTSSVFESQVDQVLVRSPFLVDSSHGHVAE
VWDFAQMAKFRFDMDPKLAACIGVDGSGASLEKGQAGESVVMRYDYEGHVTHSFAIPFDS
SECNIFCTNDTIDCTFLVQGLHKFYVNWAARELNDVGYISAAVNVANGQIFCLLGHSLAI
CDFAGNYTPLDVHFNPDLRSPRWVPGGGKRFLVISQSRGSTRLLYLVDAVNRTYVSWPVE
GDKREPDEIQVFEDQVVMWYVDRERCLEEFLTPWQGE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG