YALI0F04620g

Overview

Description similar to uniprot|Q6CCX8 Yarrowia lipolytica YALI0C05687g
Locus type CDS
Locus tag YALI0F04620g

Location

Species Yarrowia lipolytica Positions 708389..709260
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 872 (nuc.)
Previous locus YALI0F04598g Next locus YALI0F04642g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F04620g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F04620gYALI0F04620g_mRNA-001YALI0F04620g_CDS-001

Nucleotide sequence

 

>YALI0F04620g
ATGAAGCTCTCTGCCGTCACTTTCATTGCTCTCTCTGCCGTCTGTCTGGCCGCCCCCACC
GCCCCCAAGCTGGTGGCCCGGGAAGACAACACTCTCTACATTTCTGGCTCCAATGCCACC
CAGTTGGCCAAGGACTACGCTCCCGTCTACTCGCTGGCGCCTAACACGTTCGCCGCCGAC
GACGTTCAGCAGCCCATGGGCTTCCTGGACTTTTCTGGCTACGTGCAGTTCATCTCGGGT
CTGCTGTTCACCGCCTCGGACTTCTTCAAGGCCGCCACTCAGGCTGTGACCGACGTTTCC
ATCAACGAGCTCAACACTGCCATCACCAACGCCATCATGGGATTCCTCAAGTACCTTAAC
GCCTTCCTGGAGGCCACCAAACAGGGCACCCGGTTCGACAAGGCCGTGTACGCCTTCATC
ATTAACTCGGGATTCAAGGACTTCCTCACCAACGTCGGAATGTGGCTCGTCAACCTCTCC
AACAAGATTCTCGGCTCGCCCCTGCTCCAGGGCATCGTCGACCTGCTCAAGAAGCTGTGG
AACTGGATCTTTGGCGGCAAGCAGACTGTGCAGAAGGCTCTGGGCAACGACGCCGACATG
ACCGGCTTCAACCGAGCCCAACTCGCCATCAACTCGCTCCAGTCCGCCGCCGAGCAGAAG
ATCAAGAACGGTAGCAACTAGTTCCGCAGCAACGACAGTTCTATACCCTATTTATGTTTA
GTTTCGAAGCGTGCGGGCATCTGCTGACGCGAAATTTGCTGATGCGAAATCTGATGAAGC
GAGATTGCCGAGCGAAATCTGCTGAAGCGAAATATGCCATCGCGATTCCCGCCGACGCAC
TTAATTAATTTGTACCAAGACCAATTGACTGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F04620g_CDS-001

Protein length: 227 aa.
Product: Hypothetical protein of a 4-member gene family, conserved in the Yarrowia clade

>YALI0F04620g_CDS-001 MKLSAVTFIALSAVCLAAPTAPKLVAREDNTLYISGSNATQLAKDYAPVYSLAPNTFAAD
DVQQPMGFLDFSGYVQFISGLLFTASDFFKAATQAVTDVSINELNTAITNAIMGFLKYLN
AFLEATKQGTRFDKAVYAFIINSGFKDFLTNVGMWLVNLSNKILGSPLLQGIVDLLKKLW
NWIFGGKQTVQKALGNDADMTGFNRAQLAINSLQSAAEQKIKNGSN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG