YALI0F04015g

Overview

Description similar to uniprot|P15496 Saccharomyces cerevisiae YPL117c IDI1 isopentenyl-diphosphate delta-isomerase
Locus type CDS
Locus tag YALI0F04015g

Location

Species Yarrowia lipolytica Positions 600904..601765
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 862 (nuc.)
Previous locus YALI0F03993g Next locus YALI0F04037g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F04015g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F04015gYALI0F04015g_mRNA-001YALI0F04015g_CDS-001

Nucleotide sequence

 

>YALI0F04015g
ATGACGACGTCTTACAGCGACAAAATCAAGAGTATCAGCGTGAGCTCTGTGGCTCAGCAG
TTTCCTGAGGTGGCGCCGATTGCGGACGTGTCCAAGGCTAGCCGGCCCAGCACGGAGTCG
TCGGACTCGTCGGCCAAGCTATTTGATGGCCACGACGAGGAGCAGATCAAGCTGATGGAC
GAGATCTGTGTGGTGCTGGACTGGGACGACAAGCCGATTGGCGGCGCGTCCAAAAAGTGC
TGTCATCTGATGGACAACATCAACGACGGACTGGTGCATCGGGCCTTTTCCGTGTTCATG
TTCAACGACCGCGGTGAGCTGCTTCTGCAGCAGCGGGCGGCGGAAAAAATCACCTTTGCC
AACATGTGGACCAACACGTGCTGCTCGCATCCTCTGGCGGTGCCCAGCGAGATGGGCGGG
CTGGATCTGGAGTCCCGGATCCAGGGCGCCAAAAACGCCGCGGTCCGGAAGCTTGAGCAC
GAGCTGGGAATCGACCCCAAGGCCGTTCCGGCAGACAAGTTCCATTTCCTCACCCGGATC
CACTACGCCGCGCCCTCCTCGGGCCCCTGGGGCGAGCACGAGATTGACTACATTCTGTTT
GTCCGGGGCGACCCCGAGCTCAAGGTGGTGGCCAACGAGGTCCGCGATACCGTGTGGGTG
TCGCAGCAGGGACTCAAGGACATGATGGCCGATCCCAAGCTGGTTTTCACCCCTTGGTTC
CGGCTCATTTGTGAGCAGGCGCTGTTTCCCTGGTGGGACCAGTTGGACAATCTGCCCGCG
GGCGATGACGAGATTCGGCGGTGGATCAAGTAGGGATTGGCGAAGTAATTAATGGATAGT
GAACGGCGAACAGTGAACGGCG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F04015g_CDS-001

Protein length: 271 aa.
Product: Isopentenyl diphosphate:dimethylallyl diphosphate isomerase, putative

>YALI0F04015g_CDS-001 MTTSYSDKIKSISVSSVAQQFPEVAPIADVSKASRPSTESSDSSAKLFDGHDEEQIKLMD
EICVVLDWDDKPIGGASKKCCHLMDNINDGLVHRAFSVFMFNDRGELLLQQRAAEKITFA
NMWTNTCCSHPLAVPSEMGGLDLESRIQGAKNAAVRKLEHELGIDPKAVPADKFHFLTRI
HYAAPSSGPWGEHEIDYILFVRGDPELKVVANEVRDTVWVSQQGLKDMMADPKLVFTPWF
RLICEQALFPWWDQLDNLPAGDDEIRRWIK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG