YALI0F03520g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0F03520g

Location

Species Yarrowia lipolytica Positions 496334..498067
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1734 (nuc.)
Previous locus YALI0F03498g Next locus YALI0F03542g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F03520g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F03520gYALI0F03520g_mRNA-001YALI0F03520g_CDS-001

Nucleotide sequence

 

>YALI0F03520g
ATGGAATATCCCGATCTCGATCGGCTTCGGGTGACACAGCGTCCGTCGCGGCTGCAGTCG
CTGACTCTGCAGAGTATTTTGGCACAGACGAAACGACCAACGGCGTTTTTCATCACCATC
TCGCTGATCGAGGTGGGCCGAGAAGTGCTCAAAGAACACCTGGACCACATGACGGCGGAT
CTGAAAGAGCATCCGGAGCTCAAACAACATCGTGGAATGGCCACGAGCTACGTGGCGCTG
GAGCGGCTAGTGTGGCTGATCCAAAAGGTGAATCAGAGCATCCAGCAGAAGCCGCAACTA
GCGTCGGAGAGCGAGGAGGAGCTGATGCAGAACATGAGCTGGTTTTCCGAGACTCTGGAG
CAGGTCGCACGCATGTACGCCGCTTGCACTGACGAGCTCATGGACGCGGTCGTCGTCTGT
TCGATCACCATCTACATCCACGCCGCCTCCCTGCCCAACGTGGTGCCCATCTTGAGCTTT
GAACAAGAGGAGTCGGGCGAAACGGCGTCGGCGGACCTCGTCAGCATCGGCAAAAGCGTC
ACCGACCTCGCAGAAAGCATGGACGGAGTATACACCCTGCCTATTTGCTGGGATCGCGAA
CAGACGTTTTTCTTGCCGCGCGAGGAAGACATGTGGAAAATCTGGCACTTTGCCGACTCG
GAGAGCAAGGCCGTGATTGGATACGAGCTGCTACGATTTAGCAAAACGTATATTGCCGTG
GTGGAGGACGGTTCCTTTGACAATATGGCAACTTGGGCCCTCAAGGCTCCGGAGCTCATG
AGATTGTGCAGAAAGCGAAACCCATACGCTCTGTTGCTCTACTGTTACTATCTTGCTATC
ATGTACTTTGGCTTGCCTTTGTTTGACAAGTTGAAGCGGGTGGAAATGGACATTGTGGAT
ATCTGTGAGCAGGTGCCTGCCAACTTTCGACCTCATCTCGATTGGCCGTTGGAGATTTGC
TGTAGCGAGAGGGACTCGAGCGGAGAGTATGAGTCTTTTATGGAGGGCAGATTGCGACAA
AAGTTTCTGAGACCGGGTGAGGAGGAGGGGTTGGTTAGAGGAAGGCCGGATGAGGAGGGA
GTTTTGAGGGAGGGAGTTGGGGTTGGGTTGGTGGCCGATTGATTACTCGAGCGAACGAGC
GAACGAGTGAACGAGTGAAGCGAGTTGAGCATTACGGTCCGAGTTGAGCATTACGGTCCG
AGTTGAGCATTACGGTCCGAGTTGAGCATTGCGGTCCGTGTTGAGCATTACGGTCCGAGT
TGAGCATTACGGTCCGAGTTGATCGAGATCGAACTGTGAATTACCGAAGGATCTGAAACG
ATTAGCTTGCTTGCTCGCTAATCTTCGATTAGTAGACTGACAAAAAGTCGATCGCCAGCT
CCAGATGATACGCCGGCTTTTCACGACTCGCTGGCTTCAATACCATCCAGCATGTCTACA
ATCATTACCATCCCTAGTCGATTGCACGACTCATGTCTGCTTTTGACTGGAGATACTGGC
AGCCTTGTCACAGCTACTGTCCCTGATTTGTTCGACAAGGTGGAAATATGGATATGGTGC
TGGTATGTGGCTAGAGAATGCCACTGTTCGGTCGGAGTACCGATCTTCGGTGCCGTTTCG
TTTCATACATAACTATCGCCGCCTCAGGTTATCGTGACAAAAGTCACTCATCATTATACA
AGTACAAGTTACATAGACACACTAATAATAAGTAAATGCATTGGGTAATTATAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F03520g_CDS-001

Protein length: 374 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0F03520g_CDS-001 MEYPDLDRLRVTQRPSRLQSLTLQSILAQTKRPTAFFITISLIEVGREVLKEHLDHMTAD
LKEHPELKQHRGMATSYVALERLVWLIQKVNQSIQQKPQLASESEEELMQNMSWFSETLE
QVARMYAACTDELMDAVVVCSITIYIHAASLPNVVPILSFEQEESGETASADLVSIGKSV
TDLAESMDGVYTLPICWDREQTFFLPREEDMWKIWHFADSESKAVIGYELLRFSKTYIAV
VEDGSFDNMATWALKAPELMRLCRKRNPYALLLYCYYLAIMYFGLPLFDKLKRVEMDIVD
ICEQVPANFRPHLDWPLEICCSERDSSGEYESFMEGRLRQKFLRPGEEEGLVRGRPDEEG
VLREGVGVGLVAD*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG