YALI0F03476g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0F03476g

Location

Species Yarrowia lipolytica Positions 491524..492995
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1472 (nuc.)
Previous locus YALI0F03454g Next locus YALI0F03498g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F03476g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F03476gYALI0F03476g_mRNA-001YALI0F03476g_CDS-001

Nucleotide sequence

 

>YALI0F03476g
AGTGAGTATGTCTGATCGTTCCATGTGTCACGTGAATCATGAGAGATACCAGAAACAGAT
TCCACCAAAAAACCAGACCCAGATACCGCACAAAAACCCACTCATCCGCAACACGAGAAC
GGAGATACCCCGGGATTTTTGTGTCATCAGAGACTGACGTGTGAAACCCGACTAGTTAGT
CTCTGTGTCTCCAGATTGTGTGGCACCAGAGACTGTGAAACCCGACTGGTTACCCTCAGT
GTGATACCACCGCTAACACAGTGTCATCTCGCAACACAGACAGCCACGCTCAGAGAAGCG
ACTTCAAACAACCAACCTACTTTCAACCAAACTACACTTATGCCCAGAGTCCTTCAATCG
CTCACGGCTCCCGTCCCAGTCGCCACTCGATTGGGTCGCCCACTGAACTCCACCAGAGGT
TTCTGCCATCCAGTGGTTATCAGCCTACCGCTGGATCTTCTCAGAAGTCGTCCCCCCTAC
AGACTGGCTACATTGACGGTCTATATTCGACCAAGGCCTCATCCCGGCCTTCTGAATCCC
ATTACCCTTTCAGCCCAGACCACTATCAGGGAATCCAGCTGGACGAGAATGGCCGAGTTG
TGGGAACAAGCCTGTCATTAACAACTCCTCCAACTCCCTCTGGCCCAAGCTACCAGGGCG
ATTTCCAAAAATACTCACATCAGGAGACTCCTGCGCATCTCCCCTTTGAGCCACAGTCGT
CTTCGCTGACCCGGCCCTATCAGTCCCGACACTCGAGTCTGGGCCTTGGACAGCCTGTCA
GCTATCTACAGAGTCTTTCCTCGGCTCAATCTCAGAGTCGCAAACGTCACTCTCTACCCG
CTCCCTCTGTCGCCCCCCTGCCTGAGGATGGAGGCCCCATTCCGGACGGAAAAGTAATGG
ACGACCCACACGCCATTGACGCTCACGATCTTTTCTGGGCCAAGACAATCACACCCGAGT
TCCACAGTGTCGTCGAGCGGAAACGAAAGGAGAACAAGATCGACAGCTACAATCCCTTTG
CAACATTCAACCAGTGGAACGCTTGTGCTGTTTACGAGCGCAAAAACAAGCACACTCTGC
CACAGTACAAGGTGCGCAAGCTGGCGGACGGCACTCGCGGCATTTTGAAGTACGCCGTTG
AGAGCAAGGTCCCTGAGCACCTGCGGTGTCTTCCCTCTTCGGAGTTGCTGAACTCGTGCT
ATGATTGTGGACAGAGAGGGGAACATGCTGCGACCTGCGAGTTCCATCGCGAGGTTGGCG
ATGAGAGTTATGTTCCCGTCAGTGGCGATCCTGAGAATCGGAAGCGGAGGTGCGTGGGAG
GTGGGGGCAGCAACACTTTTGCTGCAGATTACAACTACAAAGACCCATCTGAGAACAAGG
AGGACCACTTTGTGACCAAAGCCTGGGACACAGTCAAGTGGAATGTGGTGAAGCGGCCGA
TTATGGCGATGCGGGCGAGAAGAAGGCGATAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F03476g_CDS-001

Protein length: 404 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0F03476g_CDS-001 MSSRNTDSHAQRSDFKQPTYFQPNYTYAQSPSIAHGSRPSRHSIGSPTELHQRFLPSSGY
QPTAGSSQKSSPLQTGYIDGLYSTKASSRPSESHYPFSPDHYQGIQLDENGRVVGTSLSL
TTPPTPSGPSYQGDFQKYSHQETPAHLPFEPQSSSLTRPYQSRHSSLGLGQPVSYLQSLS
SAQSQSRKRHSLPAPSVAPLPEDGGPIPDGKVMDDPHAIDAHDLFWAKTITPEFHSVVER
KRKENKIDSYNPFATFNQWNACAVYERKNKHTLPQYKVRKLADGTRGILKYAVESKVPEH
LRCLPSSELLNSCYDCGQRGEHAATCEFHREVGDESYVPVSGDPENRKRRCVGGGGSNTF
AADYNYKDPSENKEDHFVTKAWDTVKWNVVKRPIMAMRARRRR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG