YALI0F03344g

Overview

Description highly similar to uniprot|Q92368 Schizosaccharomyces pombe SPAC29B12.06C Cell differentiation protein rcd1
Locus type CDS
Locus tag YALI0F03344g

Location

Species Yarrowia lipolytica Positions 464480..465604
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1125 (nuc.)
Previous locus YALI0F03322g Next locus YALI0F03366g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F03344g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F03344gYALI0F03344g_mRNA-001YALI0F03344g_CDS-001

Nucleotide sequence

 

>YALI0F03344g
ATGCCGTTGAAGCTGACGGCAGAAGACGACAAGCTATATTCGTGGATCGTCGAGCTGATG
CACGGCGAGGGTCGCGAGCAGGCTCTACTCGAGCTCGGAAAGAAACGAGAGCAGTACGAG
GATCTCGCCCTCATCCTATGGCACTCGTTTGGAGTCATGAGCACTCTGCTGCAGGAGATT
ATGAACGTGTACTCCCTGCTGACGCCTCCCAATCTGTCCACTGCCGCCAGCAACCGGGTA
TGCAATGCCCTGGCCCTTCTTCAATGCGTCGCCTCACACGCCGACACCCGAACCCCCTTC
CTTGTGGCCCACATTCCGCTCTTTCTGTATCCCTTTCTCAACACCACCGTCAAGTCGCGG
TCGTTTGAGTACCTGCGGCTGACATCGCTGGGCGTGATTGGCGCGCTCGTCAAGAACGAC
TCGCCCGAGGTCATTTCGTTCTTGCTGTCCACCGAAATCATTCCCCTGTGCCTTCGAATC
ATGGAGAGTGGCACCGAGCTGTCGAAAACAGTGGCGATTTTCATCGTCCAAAAAATCCTC
ATGGACGACATGGGCCTCAACTACGTGTGCCAGACGTTCGAGCGGTTCACCGCGGTGTCG
CAGGTGCTCGCCAACATGGTCCAGCAGCTGATTTCACAACCGGCCTCCCGACTGTTGAAA
CACGTGGTCAGATGTTATCTCAGACTGAGTGACAACGCCAGAGCCAGAGAGGCACTAAGA
CAGAGTCTGCCCGAGCCGCTGAGAGATGCTACCTTCAGCCAGGCTCTGAGAGACGATGCC
GCAACCAAGAGATGTCTCGCGCAGCTGTTGATCAACTTGAGTGATAGTTACGAGTGAACA
ACGAGCAGTGCAGCTGCGACTTGTGAGCGGAACTCACAGTCCTACCACGAACATCGTGCT
GCGACTAGTGACCACGACTACAGGTGTCAAAGCTGACCCATAGAGCAGTTGAATACCACT
CAGCAACCCGGTTCATGAACCGCGAGCTTACTGCATCATCGAAGACCAACAAATCGCATA
ATAGGTCACCTGGAACAGGTGGTGACCCTAAGGGGAGCTGGGAGTGGCCCGTACGTACGG
TACAACGCCACAGCATGTAAAAATATATTATCTATCTACACTAGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F03344g_CDS-001

Protein length: 279 aa.
Product: Cell differentiation protein rcd1, putative

>YALI0F03344g_CDS-001 MPLKLTAEDDKLYSWIVELMHGEGREQALLELGKKREQYEDLALILWHSFGVMSTLLQEI
MNVYSLLTPPNLSTAASNRVCNALALLQCVASHADTRTPFLVAHIPLFLYPFLNTTVKSR
SFEYLRLTSLGVIGALVKNDSPEVISFLLSTEIIPLCLRIMESGTELSKTVAIFIVQKIL
MDDMGLNYVCQTFERFTAVSQVLANMVQQLISQPASRLLKHVVRCYLRLSDNARAREALR
QSLPEPLRDATFSQALRDDAATKRCLAQLLINLSDSYE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG