YALI0F03322g

Overview

Description weakly similar to uniprot|H8WWS4 Candida orthopsilosis hypothetical protein CORT_0A06790
Locus type CDS
Locus tag YALI0F03322g

Location

Species Yarrowia lipolytica Positions 461102..462650
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1549 (nuc.)
Previous locus YALI0F03300g Next locus YALI0F03344g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F03322g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F03322gYALI0F03322g_mRNA-001YALI0F03322g_CDS-001

Nucleotide sequence

 

>YALI0F03322g
ATGTCTTCTCTACAGCCGTTTTCGGTGGACAACACCTGGAGTCACGTGGTTTCAAAGCGC
ACGGGCGACAAGCGCGAGTACGGCGGCGACAACTTGTCATCTGAGTCGTCAAATTTCCTG
CCAACCGATCAGACAGACAAACAACCCTCGAGTCCAGGAGGCAGTCTATGGTCCGACAGA
GAGGGCTGGAGCTCGCAGTTCGACCTGCCGTCGAGTCCGGTCCGAAAAAAGCGGTTTCTG
GGCGGCATTCAGTTCACTGAAAGAAGCAAGAACAAGGAGGAGGAAGGCGGAGACGAGGAG
GGCGAAGGGGAGTCAGAAAGCCATATCGTGAGTCTCCAGAGCAATGGAACGGTCACGGAA
GATAAACCAGAGGCCACCGTGGCCAAGCTGGAGAGACAGAGTGCGGCCGAAAGCTCTTCT
ACTCCCGTTCGAACAGCTTCACGTCCGTCTCTACTTGCTCCCACGACTCCTTACAGAAAC
TACACCCGGAGCCTTAACTCGTTCAACTCGTTCAACTCGTACAACTCTCTTGGTTCGTTT
GGCGAAACCGGGGCAGGAATAGCTGCTGAAGTTGCCAGTCCTGAAAAACGTCATAAACCC
GCGCCTGTGGACACCACTCTTCCTCCTGCTCAGTACCTTCTTCAGTGTGCTGACAAGGAG
GCCGAAAACATTGATCTCATGTTTCGCAACCTTGACAAACTCCCCAAGGAGTTTAGCGAG
CTCAAAAATGTGGTTAAGACCAACAACAGCCCCTGTACGGCATCTCTGGCCATGTCCTAC
AAGGTCATGTTGTCTCAGAACAGACTGACAGATTTGCCACCTCAATTGTTTGACGGGATT
AATATTGTGAATCTGTCCGTCTTCAACAACTGCCTGGAGTCGGTTCCGCCTCGAATCAGA
GACCTCACCAACCTCGACACGCTCAACGTGAGTGGAAACGTCAACCTCAAGTACTTGCCG
TCCGACATTCAGAAGCTCAAGAAGCTCAAAAATCTCAAGGCGTCCAATGTCGGCTTTCCC
CCTCTTCCCAAAGGTGCCCCAAGTCCCGCAGGCAAAAAGAGACACATGCTGCATCGCGAA
ATCACCGTCGTCAACGAAGAAAAGGTGTTTCCTACGCTGATTGAACAGATTGTCATGTCG
GTTTTCAAAGCCAAGGATGGCCAACTCACAGACAAGCAAATTGCACATCTCAACGTTCAT
CAGATGGGCAGACAGTACTTTGAAGACGCTCAGCTGTCGTTTCAGGTAGGAACGTCCTGT
GGAGTGTGTGGAGAGCATATCCTCTATGAGGACAGAGTGTATGGATACGCTACGGAATGG
TGGCAGTGGCCAGGCCATGAAGAGGCGTCTGTGCACGACCAGCAGGTGATTGTGATCAGA
AGGCTGCTGTGTAAAGAGGCGTGCCTGACCGAGTTGGAACGAATGGCATAGGAAACCAGT
GGATCCAGTGACCTGGTCACACGCCACCACTTTGCTAAAATGATGATGGTGTTGGCAGTG
AACAACTTAATGAGCTAACGATAATGAATAAATGACTAAAACGATCGTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F03322g_CDS-001

Protein length: 477 aa.
Product: Conserved hypothetical protein

>YALI0F03322g_CDS-001 MSSLQPFSVDNTWSHVVSKRTGDKREYGGDNLSSESSNFLPTDQTDKQPSSPGGSLWSDR
EGWSSQFDLPSSPVRKKRFLGGIQFTERSKNKEEEGGDEEGEGESESHIVSLQSNGTVTE
DKPEATVAKLERQSAAESSSTPVRTASRPSLLAPTTPYRNYTRSLNSFNSFNSYNSLGSF
GETGAGIAAEVASPEKRHKPAPVDTTLPPAQYLLQCADKEAENIDLMFRNLDKLPKEFSE
LKNVVKTNNSPCTASLAMSYKVMLSQNRLTDLPPQLFDGINIVNLSVFNNCLESVPPRIR
DLTNLDTLNVSGNVNLKYLPSDIQKLKKLKNLKASNVGFPPLPKGAPSPAGKKRHMLHRE
ITVVNEEKVFPTLIEQIVMSVFKAKDGQLTDKQIAHLNVHQMGRQYFEDAQLSFQVGTSC
GVCGEHILYEDRVYGYATEWWQWPGHEEASVHDQQVIVIRRLLCKEACLTELERMA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG