YALI0F03300g

Overview

Description weakly similar to uniprot|P25441 Saccharomyces cerevisiae YDL150w RPC53 DNA-directed RNA polymerase III
Locus type CDS
Locus tag YALI0F03300g

Location

Species Yarrowia lipolytica Positions 459415..460834
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1420 (nuc.)
Previous locus YALI0F03278t Next locus YALI0F03322g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F03300g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F03300gYALI0F03300g_mRNA-001YALI0F03300g_CDS-001

Nucleotide sequence

 

>YALI0F03300g
ATGGTCAAAAAGGAGCAGACCGACTCTGCAGACACATCCGGCACTCCCGCGTCGACTCCC
CGTCGATCCACTCGTCTGGACAGTCTTTCCACGCGTCCCGGCGTCATTTCGGGCTCTTCA
CCTCTGTCTCGAAATGTGACGCCGTCTCCGTCGACCTCGGGCACTCCCCGAGCATCTACA
CCTGCCAGCGGGCTGAAATTCAAGCCGAAAAACGTGGCTCGACGAACCAAGGCCGAGCGA
GACGCAGACGCCCCGGTGGTCAAAGAAGAGCCTGTGCGAAACAGTCGATCTGACCGTGGA
GGCCGAGGAGGCAGAGGAGGCGCTCGAGGAGGCGCTTCTGGAGGAGCTATGGGCCGAGGA
AGAGGCAAATTCGACAACATTGTCACCTCGCAGGCCCAGGGACCACTTGCAGCGCCTCCT
GCGGGCTACGGATCCACTGGAGGAGGCTGGGGAGGTCGAGGAACCACTTCTGCTGGTTTC
TCACGAGTGGGAGGGGGAAGAGACAGCCATTCGCCTCTGATTCGAAGCCAGTCACCCCAG
GTCAAGAGCGAAGAGGGCGAAGACGGAACCCCGGTGCCCGGTTCGTCTAATGGCCGGTCT
CGTGAAGCTACAGTTGACTTGCATGATATGCACGACATGGCTATCAGTATGGGCGAACAG
AAACCCATTCCCGGCCACATTGAGCAGTATTTCCCCATCCGAATCGACAAGCAGGATCTG
GAAAGTGTGTCTGCCACCGCCGCGGGCTTTTCTTCGCTCTCTGTCAAGGACTCTCTGCTG
AACATGGTGGAGGAGGAAAACAGCTCTGGCATCATTGACACGCCCAAGGAGATTCTGGAG
GTGTCTCGAGCGCTGGAACAAGGCCGGTATATGGCTCCCGAGCAGGTGGATGAGGCCCGA
CGGGCTGTGATTGACTCGGTGAACATTTCCAAGGAGTTTGGACTGGGAGGAAGTGACACC
ACCGAGATGGAGCAGAAACTGTACCTGTTCCAGCTGCCTCCAATCATTCCTTCCTTCCAG
GCTGCTGAGAAAGAACAGGTTGATGTGGACATTGAGGACAGTGAGGGGGATAGAGAGAAG
GAAAAAGATAATGAAGAGGAGGACAATGATGTGGAAATTGTGGCTAAAGACACGGTTGAG
TCCGACGAACCATCCATCCCATCTCTTCCTGAAGGACAGGTGGGCAACCTGCGTCTGCAT
AAATCCGGCAAGCTGACCATGGTCATCGGCGACATTGTCATGGATGTGACCCAGGGCGTG
CCAGCCAAGTTTCTGCAGGACATTGTGGTGTGTTCGGCCGAGGAAAAACAGGCCTATTTG
ATTGGCCAGGTTAAGAGAAAGATGGTGGTTACTCCTAAGCTGGATGAGCTCTTGTAGGTA
GGGGTATGTTGCATGTATTAATAGATTATAAGGAACGGTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F03300g_CDS-001

Protein length: 459 aa.
Product: Conserved hypothetical protein

>YALI0F03300g_CDS-001 MVKKEQTDSADTSGTPASTPRRSTRLDSLSTRPGVISGSSPLSRNVTPSPSTSGTPRAST
PASGLKFKPKNVARRTKAERDADAPVVKEEPVRNSRSDRGGRGGRGGARGGASGGAMGRG
RGKFDNIVTSQAQGPLAAPPAGYGSTGGGWGGRGTTSAGFSRVGGGRDSHSPLIRSQSPQ
VKSEEGEDGTPVPGSSNGRSREATVDLHDMHDMAISMGEQKPIPGHIEQYFPIRIDKQDL
ESVSATAAGFSSLSVKDSLLNMVEEENSSGIIDTPKEILEVSRALEQGRYMAPEQVDEAR
RAVIDSVNISKEFGLGGSDTTEMEQKLYLFQLPPIIPSFQAAEKEQVDVDIEDSEGDREK
EKDNEEEDNDVEIVAKDTVESDEPSIPSLPEGQVGNLRLHKSGKLTMVIGDIVMDVTQGV
PAKFLQDIVVCSAEEKQAYLIGQVKRKMVVTPKLDELL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG