YALI0F03135g

Overview

Description weakly similar to uniprot|Q4WZ81 Aspergillus fumigatus C6 transcription factor
Locus type CDS
Locus tag YALI0F03135g

Location

Species Yarrowia lipolytica Positions 434561..436329
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1769 (nuc.)
Previous locus YALI0F03113g Next locus YALI0F03157g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F03135g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F03135gYALI0F03135g_mRNA-001YALI0F03135g_CDS-001

Nucleotide sequence

 

>YALI0F03135g
ATGAAACGCACCCGAAACCGCCTGCCCGTGAGCTGCACTTTTTGCCATGCCCGCAAGTTG
CGCTGCGACCGCAAGACCCCCTGCTCCAACTGCGTCACTCACCAACGCCAAAACTGCAAC
TATCTCAAGAAGCACGACAGCAAGAAACATACCGCAACGGTCAACACGCTGGCGCCGGAA
TCTCTGACCCATATCGGCGATGCGCAGATCTACACGTCGTCAATCAGTGTAGCGGCTCTG
GCTGGGTCGGGATCACACAGCAACGTGGAGGGAGTAAAGCCGACGCCAAGAGAACAGGAC
CCGCCCTTCTTGCACAATGTGTTTCGACTGCTGCATCAGAGCGCACGCGAGAAAATCGAC
ACTAACCCGCATCTATGGGCCCGCTTGCTACCCTCGAGAGCCCTGTGTGAACAACTGTGT
CAACGGTACATGGACACCATCAACGTGTTTCATTTCGCAGTCGGACCAGCCCAACCGCAG
CTCTGGATCAACACCGTCTACTCCAAGGACCCCAGTAAACCGCACACAAACGCTGAATTG
AGAGCCATGGCCCTGGTGCTGCTCATGATGCGTCTGGGACACATTGCTACCCATGACGAC
TGTCCAGACTACTGCGCAGACACATACCTCGGCCCAAGACTGCAACACATTGCCGAGTCG
TTCCTACAGGCCACAGTGACGCACAATTCCATGGCATTGGAAGGGTTTCAGGCCCTAATT
CTACTCAGATGCCATGCCGTCTTCTCACCCCAAAACATTGACACCGACCAACGAGATAAT
GGAATCGTGCACTCGTCCATGTCTCTGGTATCTACAGCAGTCACCATGGGCTTGCATCGA
GACCCGTCCGTGTTCAAACTGCCAGACTCGACCGCGGCGCTTTGGAGAGGTCTGTGGTGT
CACGTGCTAGTCTGTGATACGTTCCATTCACTCAACACAGGAACGCCCCTTTCCAACGTG
ATTGACACTTCTGATGTGCGTATCCAACAGCTAGATCTGTCTGCTCTAGCAACCACAGAT
GCCGAAAAAACGTACCTGACCCAGTGTGCTCATTCTCTGTCGCTCTATACTCGCATGTGT
CGACTGATGCGCAAAGGTCTGTCCTTCATCTTCACCCCCTCGGGCCTCACAGACGCAAAC
TACCAGATCATAATCTCAGACATTCAGGACTTCCGCTCCAGTCTCAATCTGCATATGGAA
CAATGGGTTGTGACGGACGAAATCAACGCAGCCAATCGGTTGGTGCTGCTTCTGGGAGCT
CTACAACTGCAGTCTCTTATCAATAGAGCATGTCAGGTGCCAGCGAACGAGGCACCCAAG
TCGCACCGACGCCTGCTCTTCACATGCCTGGAAATCGGCTCGGTATGCGACTACTTGTCC
TCCAACATGGGCCACTTTAAGTCCTTCTCGTGGCCAATCAAGGCCATCTTTCTGCGAGTC
TCCACGCTCACTTGTCTTAATCTGTGCTCCTTGGCATGGCAAGCCACCAAGATGAATGCC
ACGGACTCATTGCCGGAGATCTTTGCCACCTGCGACACTCTTCTTGCCTGGATTTCGTCC
GTTGGCGCTGTCTACGTGACTGCTCACCAGGCACATGTTCATTTGACGAGACTCCTGGAC
ATTGTCAAGAGAGAGCACAATGTCAGTGTGGACATGATGGGTTGGTATATGGGAGATGTG
GACTCGCCACTGATGGAATGGTTGATTCAGGCGCCTAGCTTCTAGTAGGCTATTTTCACT
ATAGAACAATAGATATTTATTTACGATTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F03135g_CDS-001

Protein length: 575 aa.
Product: Conserved hypothetical protein

>YALI0F03135g_CDS-001 MKRTRNRLPVSCTFCHARKLRCDRKTPCSNCVTHQRQNCNYLKKHDSKKHTATVNTLAPE
SLTHIGDAQIYTSSISVAALAGSGSHSNVEGVKPTPREQDPPFLHNVFRLLHQSAREKID
TNPHLWARLLPSRALCEQLCQRYMDTINVFHFAVGPAQPQLWINTVYSKDPSKPHTNAEL
RAMALVLLMMRLGHIATHDDCPDYCADTYLGPRLQHIAESFLQATVTHNSMALEGFQALI
LLRCHAVFSPQNIDTDQRDNGIVHSSMSLVSTAVTMGLHRDPSVFKLPDSTAALWRGLWC
HVLVCDTFHSLNTGTPLSNVIDTSDVRIQQLDLSALATTDAEKTYLTQCAHSLSLYTRMC
RLMRKGLSFIFTPSGLTDANYQIIISDIQDFRSSLNLHMEQWVVTDEINAANRLVLLLGA
LQLQSLINRACQVPANEAPKSHRRLLFTCLEIGSVCDYLSSNMGHFKSFSWPIKAIFLRV
STLTCLNLCSLAWQATKMNATDSLPEIFATCDTLLAWISSVGAVYVTAHQAHVHLTRLLD
IVKREHNVSVDMMGWYMGDVDSPLMEWLIQAPSF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG