YALI0F03113g

Overview

Description some similarities with uniprot|P32581 Saccharomyces cerevisiae YJL106w IME2 ser/thr protein kinase
Locus type CDS
Locus tag YALI0F03113g

Location

Species Yarrowia lipolytica Positions 428873..431480
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 2608 (nuc.)
Previous locus YALI0F03091r Next locus YALI0F03135g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F03113g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F03113gYALI0F03113g_mRNA-001YALI0F03113g_CDS-001

Nucleotide sequence

 

>YALI0F03113g
ATGCCACCCACGAAAACACAAACACATCCAGACATCCAACCTGTCACAGAAGACAGGAGG
TCTCTCACAGTCAAGTCGCTGGATGACCGGTATGTGCTGCTCAAGAACATCGGCAAAGGC
TCATTTGGCCATGTGTCGCTCGCACGGGTCAGATCAAAGGCCGCCATGGAGAACGAGGAC
ATGCGCGCAGGCTCCATGGTTGCCATCAAAACCATGAAGAAGAAACTCGCGGCCATCGAC
GACTACAACCTCCTGCGAGAGGTCGAGTTCATCCGTGAAGTGCGCCCCCACCGCTTCCTG
GTCAATGTGCACGACATGTTTGTGGACTCGGTCAACCACCACTTTCATATGTCAATGGAG
GTCATGGAAATGAACCTCTACAACCTCATGAAGGCACAGGAGAAGGTGCCGTTCCAGCCC
CACGCCGTACGGTCCATGCTGTGGCAAATCATCTGCGGTATTGACCACATCCATCGCCAT
AACTTCTTCCATCGAGACATCAAGCCTGAAAACATCCTGGTGTCTCGTTATCTCCCCTAC
CACAACGAGAACTCCTCTTCCCCACACTCGGGATTCCGGATCAAAATTGCCGACTTTGGA
CTGTCCCGTCACATTGAAGACAGAGACCCTTACACAGCTTACGTGTCCACCAGATGGTAC
CGCGCCCCCGAGATTCTCCTCCGGTGCGAGTACTACTCTGCTCCCGTGGACATCTGGGCC
TTTGGAGCCATGGCTGCCGAGGTGGCAAATCTAAAGCCGCTGTTCCCCGGCACCAACGAG
CTGGACCAGTTCAGCCTCCAGGTGGCATTGTTGGGCACCCCCGGCCAAAACTCTCTCGGA
GGTCGATGGAGTCGACACCCAGAGTTATGTTCCAAGCTCAACATTAATATTGACGCCCAA
ACTGGCCAAAGCTCCAACAGCATCATGTGCAATCCTGAACACGCTTCGCTAACCGATGTG
GTGCTCATGTGCCTCACGTGGGACCCAGACGCTCGGTGCTCCGCTCGTGACATTATGTAC
CACCGGTACTTTGCCCAAGAGTCATCAATCGAGGTGCCCCGCACTCTCAAGCGCAGCCCC
CTCCGCATCACCAAACAGGCAGCCATGAACCCCCATGGCGACCCACCCATTCTGATGGAC
CCCAGTCTCCGCCACAATAACAGCAATGCTAACAACAGTGCCATCGTTCCTACTTTGGCT
TCTTCCCTCAAACAGAACCAGGGTCTCCAGATGAACAAGTCGCATCTCTCTGGTGTCAAT
GGAAGCACCAAGAGGAACAGCCTGTCTGGGGCTGCTGCCGCTGCCGCCATGTCCATGTCC
TTGTCCCTTGCATCCAAGAACTCTTCTGTCAATTCTGGAGGTGCAGGCTTCCTGGCCGGT
GCAGCCCCTGCCAAGAAGAAGTTTGGCCATTGGGCCAACATTTTTAAAAGAGACTCCGAT
GTGGCTTCCTCTGAACTGGAGCGGGTAGGTCCCAACAAGGAGAACGTTCCGAGCATTGTT
CCGACGCAGACCCCCAACAGAGGAGCTGGCGGGGTAGGTATCGTGCCCAAGATCCCACTG
CCTCAGCTGCCGCCTCTTGAAACCATTGCTGCATCCATCGAGAGCCTATCCATCGAGGCC
AGGTCTACAAACACCACACTGACTGAGCGGATGACATCGGGACCGCCAACAGGAGGGACT
AGCGACAGCGAGTGGAGCACCACCAACGCTAGCATCTCCGAAAGCGTGGGCCACGACAGT
GGGGCTGGGAGCAGTGGTGCTGTGGACAAGGGGAGTACTGGAACAACTAATTTCGAAGTT
GAGGCCTTAATGGAGAGTACCGAGGCCCGAGTGACTGTCAAGACACTCCCCCAAACCCCG
GACAGCGCCTCATCATACGACCAGATGCCTCCTCCCCCCCTCCCTCTTCCAAAGGTGAGA
GTGACGGCCAAGCCTCTCAACGCCATAAAGCCTGAGAGTCCCACGCAGGTACAAGTATCT
CTGTCGCCTCAGCCATGCATCAAGCCCCCGAGCCCGGCGTCGTCTCATTACGAGCCGCCC
GCGTGTCTGGACGAGCACTCCGACAGCCAGCTCACCGCTTACGAGCGCTCCGTCCGAGAT
TCGGTGCTGCTGATGAGTTTCACTCTGCCGCCATCCTCTCAGGAGTCGTGTACTTCTCTG
GAGGGCGCATCCGAGTCGCCATCAGTCAATGATTCTCCTCTGGTTGACCAGTTTGGCGGC
TCGTCCAGCGATATCCGCATCGAGACGACTTCGTTCTTGACTCCCGACCTCGACAAGGGC
AACGTTTGGGTCAGGTCAGAAGAGCTGGAGTGCCCCGTATACCCCGGTCTCCAAACCAAC
AGCTTCCGCGACCGCAAGATTGGTGCAGGTGCGATTAGCAGCAACAACATAGAGGTAGAG
TAGCTGAGCTGACTGCACCATTAGATTTTTTGCGCTAGACTTGGTCCCTGGAGAGTGGAG
AGTCTACATTTGCTAAACTGAATTCATCTATTTATTTAAAGCATATCATGGAGCTATCGA
GATGTCGTAGGGCTGTAGCCAAGACTCGAACTGCGTGTTGTGCCTTCCTAATTAGTTGGC
GTGTAGAAACAATACAACACAACATGTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F03113g_CDS-001

Protein length: 801 aa.
Product: Conserved hypothetical protein

>YALI0F03113g_CDS-001 MPPTKTQTHPDIQPVTEDRRSLTVKSLDDRYVLLKNIGKGSFGHVSLARVRSKAAMENED
MRAGSMVAIKTMKKKLAAIDDYNLLREVEFIREVRPHRFLVNVHDMFVDSVNHHFHMSME
VMEMNLYNLMKAQEKVPFQPHAVRSMLWQIICGIDHIHRHNFFHRDIKPENILVSRYLPY
HNENSSSPHSGFRIKIADFGLSRHIEDRDPYTAYVSTRWYRAPEILLRCEYYSAPVDIWA
FGAMAAEVANLKPLFPGTNELDQFSLQVALLGTPGQNSLGGRWSRHPELCSKLNINIDAQ
TGQSSNSIMCNPEHASLTDVVLMCLTWDPDARCSARDIMYHRYFAQESSIEVPRTLKRSP
LRITKQAAMNPHGDPPILMDPSLRHNNSNANNSAIVPTLASSLKQNQGLQMNKSHLSGVN
GSTKRNSLSGAAAAAAMSMSLSLASKNSSVNSGGAGFLAGAAPAKKKFGHWANIFKRDSD
VASSELERVGPNKENVPSIVPTQTPNRGAGGVGIVPKIPLPQLPPLETIAASIESLSIEA
RSTNTTLTERMTSGPPTGGTSDSEWSTTNASISESVGHDSGAGSSGAVDKGSTGTTNFEV
EALMESTEARVTVKTLPQTPDSASSYDQMPPPPLPLPKVRVTAKPLNAIKPESPTQVQVS
LSPQPCIKPPSPASSHYEPPACLDEHSDSQLTAYERSVRDSVLLMSFTLPPSSQESCTSL
EGASESPSVNDSPLVDQFGGSSSDIRIETTSFLTPDLDKGNVWVRSEELECPVYPGLQTN
SFRDRKIGAGAISSNNIEVE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG