YALI0F02695g

Overview

Description highly similar to uniprot|B6QF70 Talaromyces marneffei putative eukaryotic translation initiation factor eIF-4A subunit
Locus type CDS
Locus tag YALI0F02695g

Location

Species Yarrowia lipolytica Positions 395846..397256
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1411 (nuc.)
Previous locus YALI0F02673g Next locus YALI0F02717g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F02695g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F02695gYALI0F02695g_mRNA-001YALI0F02695g_CDS-001

Nucleotide sequence

 

>YALI0F02695g
ATGGCCGAGTTTGATAGAGATCTCGATGACGAGCTGGAGTTCAAGACGTCCAAGGACGTG
GACGTGACGCCCACCTTCGAGTCGATGGATCTCAAGGACGACCTTCTGCGGGGAATCTAC
GCGTACGGCTTCGAGGCTCCCTCTGCCATCCAGTCTCGAGCCATCACACAGATCATCAAG
GGTCGAGATACCATTGCACAGGCACAGTCCGGAACGGGAAAGACAGCCACTTTCTCTATT
TCGATGTTGGAGGTGATTGACACCAAGCATCGGGAAACACAGGCCATGGTTCTTTCTCCG
ACACGAGAACTGGCCACCCAGATCCAGAGCGTCATTCTGGCTCTGGGCGACTACATGAAT
GTCCAGTGCCATGCTTGCATTGGTGGAACGTCGTTGTCGGTGGACATGAAGAAGCTGGAG
GCTGGTCAGCAGGTGGTTTCTGGAACCCCCGGACGGTGTCTGGATATGATCAAGAAGGGC
TGTCTTCGAACCAAGAACCTCAAGATGTTGATTCTCGATGAGGCCGACGAGCTACTAAAC
AAGGGCTTTCAGGAGCAGATCTACGACATTTACAGATACCTGCCTGCAGCCACTCAGGTA
GTGGTTGTCAGTGCTACTTTGCCTCACTCTGTTCTCGAGATGACCTCCAAGTTCATGACT
GATCCGGTCCGAATTCTGGTTAAGCGAGACGAGCTGACGCTGGAGGGACTCAAGCAGTAC
TTTATTGCTGTTGAGCAAGAAGAGTGGAAGTTTGACACGCTGTGCGACCTGTACGACACA
CTGACTATTACTCAGGCCGTCATCTTCTGCAACACGAAAAAGAAGGTGGACTGGCTGACA
CAGCAGATGAAAGACAACAACTTCACCGTGTGTTCGATGCACGGAGATATGGCTCAGAAG
GACCGAGACTCGATCATGAACGAGTTCCGAAGCGGCAGGAGCCGGGTACTCATCTCCACT
GACGTTTGGGCCCGAGGTATCGATGTTCAGCAGGTGTCGCTGGTCATCAATTATGACCTG
CCTCCCAACCGAGAGAATTACATCCATCGAATCGGTCGATCCGGTCGATTTGGCCGAAAG
GGTGTGGCGATCAACTTTGCTACTAACGATGATATCACCACTCTGAGAGATATCGAGCAG
TATTATAGTACTCAGATCGATGAGATGCCGGTGAACGTGACGGATATGATGTAAGTGCCA
ACCCACCGACATCGAGGAGCTGCCATATCAAATTTCTTGCTCCGAGAGGATGGCCAACAC
CATCCATATATACCAGAATCGAAGAGCTTGCTTGCTCTGAGAGGATGTTGTATCAGCATG
ACTGCCCTGTATCAACAGGCGATATATACTTGCTGAATGAGTAGCAACCACAACAGCTCA
ATAATTGAATGACATATGTACAGTAGAATTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F02695g_CDS-001

Protein length: 398 aa.
Product: Eukaryotic translation initiation factor eIF-4A subunit, putative

>YALI0F02695g_CDS-001 MAEFDRDLDDELEFKTSKDVDVTPTFESMDLKDDLLRGIYAYGFEAPSAIQSRAITQIIK
GRDTIAQAQSGTGKTATFSISMLEVIDTKHRETQAMVLSPTRELATQIQSVILALGDYMN
VQCHACIGGTSLSVDMKKLEAGQQVVSGTPGRCLDMIKKGCLRTKNLKMLILDEADELLN
KGFQEQIYDIYRYLPAATQVVVVSATLPHSVLEMTSKFMTDPVRILVKRDELTLEGLKQY
FIAVEQEEWKFDTLCDLYDTLTITQAVIFCNTKKKVDWLTQQMKDNNFTVCSMHGDMAQK
DRDSIMNEFRSGRSRVLISTDVWARGIDVQQVSLVINYDLPPNRENYIHRIGRSGRFGRK
GVAINFATNDDITTLRDIEQYYSTQIDEMPVNVTDMM*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG