YALI0F01903g

Overview

Description weakly similar to uniprot|P38187 Saccharomyces cerevisiae YBL067C (ohnolog of YER098W) UBP13 ubiquitin carboxyl-terminal hydrolase
Locus type CDS
Locus tag YALI0F01903g

Location

Species Yarrowia lipolytica Positions 295699..298350
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 2652 (nuc.)
Previous locus YALI0F01881g Next locus YALI0F01914g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F01903g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F01903gYALI0F01903g_mRNA-001YALI0F01903g_CDS-001

Nucleotide sequence

 

>YALI0F01903g
ATGTCCCTCAACGGCTCAAGGAACGACCACGCCAATGGTGGTGGCGTCATGATGCAACGA
CATCTGGCTCCTCCAGCCACTCAGACCCCACAACACAACCCATACCAGTTCTCCACAACC
CCGACCCATAGTGTGTCGCAGGTGAACTCGTCCAACAACTTGCCGACTACCCCCAAGGAT
CTGCCTCCCTCCTCGGCACCCGCCACATCAGCCTTGACGGCTCCATCCAACCGGTTCTTC
GGCATGGAAAACTTTGGCAACACATGCTACTGCAACTCGGTGCTGCAGTGTCTCTACTAC
ACAAAGCCGTTCCGAGATCAGGTACTGGCCTTCGCCAAGGACGACTCGCGGCCCAAAAAA
CGCAGCGTACCCGGAAAGACGCCGCATCCATTCACTGTCAACCCCGAGTCGGCTATCTTG
TCGACTTCAACTCCTCAAGCAGCCAACCCTGCTCCTCCAGACTCGGCAGGAGCAGCCACC
TCCGGACTCAGCAGTCTGTCTTTGGGCCTCAAATCGCAGGAGTCTGTCAATTCCAGCGGA
AACCCGCCCAGTAGCAGCGGTAATGGAAAGCTGTCCAGGCGACTGACTATGTTTGGCAAG
AAAAACAAGGACAAGGACGCGGATCAGTCGACAAACGGGGGCCCGCCCGGATCTGCAGGA
GGACCCCCCAGCTCTGCGGGAGGCTCGGGCTTTGTTGGAGGCATCTCTGCATCCCCTGCT
TCCAACAACAACAATCAGGCAAGCTCGGCTCCTCCAGCTCCAGGCTACATTGGTGAGAAC
GCTCCGCCACTGAACATTCTACAGAGCAAGCCCAACTACCCCGGTCTGGAGGGAATCCCC
CTGGGCCACCGACTGCCCAACGCAAATGTGCCTGTAGTGGGCTACACCGAAGACCCGTTT
GCCACGCCGGAAAATAAGAAAAGAGCGGCGCTGATCACGGGCCCCATCATCAACCTGGAC
CACTCGTTTGCCCAGGACTACAGCATGAAGGAGTCCCTGTTCACCGCGCTCAAGGACATT
TTCGAATGCATGAGCGAAAACTCGTCACGAATTGGTATCATGTCTCCCAGCAACCTCATC
ACCGTGCTCAAGCGCGAAAACGAGCTCTTCAGATCCTCAATGCATCAGGATGCACATGAG
TTTCTCAACTTTTTGCTCAACGAGGTCATTGAGAGCGTGGACGGCTCGTCGGCATCCCGA
GACGATTCCAAGTGGATCCACGAGCTGTTTGAGGGCTCTCTGACATCGGAAACAAAGTGT
CTTACTTGTGAGTCGGTCTCGCGTCGACATGAGTCATTTCTGGACCTGTCGATCGATCTG
GAACGAAACTCTTCGGTCACAGCCTGTCTTCGTCAGTTCTCTGCCTCAGAAATGCTCTGT
GAACGAAACAAGTTCCACTGCGACACGTGCTGTGGACTGCAGGAGGCCGAGAAGCGAATG
AAGATCCAGCGGCTACCCAAGGTCCTGGCCCTGCATCTCAAGCGGTTCAAGTTCACCGAG
GACATGCAGCGAAACACCAAGCTGTTCCACCGTGTGGTCTACCCCAAGTACCTGCGAATG
TTCGAGACCACCTTCGATTGTCCCGACCCCGACAAGCTTTACGAACTGTACGCGGTGGTC
GTGCATATTGGAGGAGGCCCCTACCATGGTCATTACGTCAGTGTGGTCAAGACAGAGCAT
GCTGGCTGGCTGCTGTTTGACGATGAAATGGTCGAGGCCGTGGACCCCCACTATGTGTTC
AACTTCTTTGGAGACAACCGAGGTCTGGCCTCGGCCTACGTTCTCTTCTACCAGGAGACT
ACTGTGGACCAGATGGAGTCGGATAACCTGTCCAATGACGTGTTCAACGTCACCACTAAC
GCCAATGGCGAGCTGATCGAGCACGTTTCGTCCACCGAGAGTGTTCCCCTTCCCTCATCG
TCGCTGCCCAACGTCCGAGAAGATGACGAAGACGGTCCTCTGCCTACAATCACCACAGGC
TTCAACTCTTCTACTGCTCTGAGTAGTGGCATCCAGAGTGGCGTCTCCAGCGCGGCCGGC
AGCTCCTCTAACCTCCCCTCCAGTGTGGGAACCAACTTTCCGGCTGCCTCTTTGCCTTCC
CTACAAGAGTCATTTGCCACATCTCCACATCAACAGCAGCATCAGCCCCAGCAGCAGTTT
GGTTTCCCCCAGCAGCCATCTGTTGGATTCCCCCAGCCCTCTCCTGCTCCGTCTCAGAGC
TCTTCGGTGGTGGGCAATTCGATGATGTCGTCGTCGATTCCTGGAAGCACGTCCATCCAC
TCTGATCTGTCGTCGTCCCACCACTCCACGGCCAACACCTCAATGAGTGTACCTGCTCCC
CCTCCTTCTGCAGGGACCGACAGCGCGCCTCCTTCCAGTAGTGGCAACAAGTTCTGGCAG
CGACGAGACCGGTCTGTGTCCAACACGTCCACCGAGTCGGCCGGCAAGAAGAGCCGGTTC
TCCTTTGGACGAAAGAGATAACAACATCTACTTAAAATGCATTTAGAAATAGTAATGGTT
ATGTATATGTAGTAGAGGGTACTTGTTGTACCTGTCGTCGGCGACGGCTATCAGGTAGAT
GTGAAGCCGAGTACACAAGTATTTGCAAGCAGTATCCATTGGTCTATAGAACAATAAGGA
GTTGAATCATCT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F01903g_CDS-001

Protein length: 827 aa.
Product: Conserved hypothetical protein

>YALI0F01903g_CDS-001 MSLNGSRNDHANGGGVMMQRHLAPPATQTPQHNPYQFSTTPTHSVSQVNSSNNLPTTPKD
LPPSSAPATSALTAPSNRFFGMENFGNTCYCNSVLQCLYYTKPFRDQVLAFAKDDSRPKK
RSVPGKTPHPFTVNPESAILSTSTPQAANPAPPDSAGAATSGLSSLSLGLKSQESVNSSG
NPPSSSGNGKLSRRLTMFGKKNKDKDADQSTNGGPPGSAGGPPSSAGGSGFVGGISASPA
SNNNNQASSAPPAPGYIGENAPPLNILQSKPNYPGLEGIPLGHRLPNANVPVVGYTEDPF
ATPENKKRAALITGPIINLDHSFAQDYSMKESLFTALKDIFECMSENSSRIGIMSPSNLI
TVLKRENELFRSSMHQDAHEFLNFLLNEVIESVDGSSASRDDSKWIHELFEGSLTSETKC
LTCESVSRRHESFLDLSIDLERNSSVTACLRQFSASEMLCERNKFHCDTCCGLQEAEKRM
KIQRLPKVLALHLKRFKFTEDMQRNTKLFHRVVYPKYLRMFETTFDCPDPDKLYELYAVV
VHIGGGPYHGHYVSVVKTEHAGWLLFDDEMVEAVDPHYVFNFFGDNRGLASAYVLFYQET
TVDQMESDNLSNDVFNVTTNANGELIEHVSSTESVPLPSSSLPNVREDDEDGPLPTITTG
FNSSTALSSGIQSGVSSAAGSSSNLPSSVGTNFPAASLPSLQESFATSPHQQQHQPQQQF
GFPQQPSVGFPQPSPAPSQSSSVVGNSMMSSSIPGSTSIHSDLSSSHHSTANTSMSVPAP
PPSAGTDSAPPSSSGNKFWQRRDRSVSNTSTESAGKKSRFSFGRKR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG