YALI0F01793g

Overview

Description weakly similar to uniprot|P38217 Saccharomyces cerevisiae YBR017c KAP104 beta-karyopherin
Locus type CDS
Locus tag YALI0F01793g

Location

Species Yarrowia lipolytica Positions 276624..279490
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 2867 (nuc.)
Previous locus YALI0F01771g Next locus YALI0F01815g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F01793g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F01793gYALI0F01793g_mRNA-001YALI0F01793g_CDS-001

Nucleotide sequence

 

>YALI0F01793g
ATGTCCTGGGAACCGCAACCCCAAGTCCACGCGCAGCTCCTGGAGGTGCTGCAGAACTCG
CTGCGGGGCAATAACGCCGCCCAGCGCCAGGCCACCCAGCAGCTTAGAGAGGCCCAGGCC
CAGCCTGACTTTGCAAACTACCTCATGGCGGTGTTGATTGACGACAAGGCTGGCCCGCTC
GACGTGCGGTCCTCGGCCGGACTGTTGCTTAAAAACCTGATTAGATTCGACTTCAAGGAT
CTCAACGATGCCGGCAAGACGTACGTCAAGGCCCACGTCTTCACAGCCCTGGTGGAGCCC
GCCAACATCATCCGAAACACGGCAGGAACCATTGTGGCGTCGCTGATGCAGCGGGAGGGA
ATCAGCGGGTGGCCCGACGGGCTGACTACACTCATGGGCCTGGCCGAGAGCTCGGACGCG
AACGCCCAGCTCGGAGGAATGGACGCCCTGTCCAAGATCTGCGAAGACATGCCCGTGGAG
CTGGACCAGACATACGGCAGCCAGCGGCCACTGGAGTACATGGTGCCCAAGTTTCTCGAG
TTTGTCCGGTCGCCCGACTCGTCGCACCAGAAGCGAGTGCAGGCGCTCACCTGTCTCAAC
CACATTGTCGAGGTTGAGAGCCGATCCATTGCTAGCCGAATGGACGAGTATCTGGAGATC
TTGTTTAGTCTGGCCAACACGCCCGATGTGGAGACCCGAATCCAGATCTGCAATGCCTTC
ACCGGAATCCTGCGAACCAACGCCGAGAAAATTGCACCCCATCTTGGAGGAGTCATTCAG
TACGCCCTCCATTGCATCTCTGCCTCCGAGGAGGGCGACACTCTGGACTTCCAGGCTTGC
GAGTTCCTGTTGCTGCTGACTGAGCTGGACCCCAACCCGGAGGCGCTGTCGCCGCATCTT
GGGGACCTTGTTCCTGCTGTTCTTCGAGCCATGGTCTACTCCGAGACAGACGTGTTCATG
CTGGAGGGCATCAACGAGGACGATGCCGACGTGGCCGACCGAGAGGAGGATCTCAAGCCC
ATCAACTTCCGACAAAAGGCCGCCCACGGCAACAAGAAAAACGAGGCTGAGGGACAGGAG
CCCGATGAAGACGAATCTGACGATGAGGAGGACGACGAGGTGCGAGGCCTGGAGGCCTGG
AATTTGCGAAAATGTGCCGCCTCCACTCTTGACCGACTTTCTAACATTCTTCCCGAGGAG
GTTCTTGAAGCTGCAATGCCCTACCTCAAGCAGACCATTGTCTCTGACGAGTGGCCTGCC
AGAGAAGCTGCCATTCTGGCCTTTGGAGCCATTGCTGATGGATGCCAGGATATGGTCGCT
CCTCATCTGCCCGAGCTGGTGCCCTTCCTGATTCAGCGATTGTCTGACCCTCAATTCCCC
GTTCGACAGGTTTGTTGCTGGACCCTGGGCCGGTTCTCAACCTGGGTCTGCGAACAGAGC
ATGTCCGAGCAGGACACTTACTTCATCCCCACGCTTACAGGTCTCTTTACATGTGCCCTG
GACCGAAACAAAAAGGTGCAGGTTGCCGGCTGTTCTGCCGTGGCCACCTTCACTGACGAG
GCCCGAAACATGCTGACTCCATACCTCGGCCAGATTCTCGAGCAGTTTGCGCTCTGTTTC
CGACGCTACCAGAAGAAGTCGCTGCTGTTCCTGTACGACGCAGTTTCGACTCTGGTCAAG
TATTGCGGCGCCGAAATTGCCGAAAACCAACAATACATGGAGACTCTGATGCAGCCTCTG
ATTGCCAAGTGGGAGCAGATTAGCGACGACGACAACGCCCTGTGGCCACTGTTTGAGTGC
ATGTCTGCCGTGGCCTCGTACATGGGCCCTGCATTTGAGCCCTATGCTCCCCCTGTGTTT
GACCGATGCGCTCGTCTGCTGCACTCGTGCTTGGTTCAGGATCAGAACTTTTCCAACGAC
CCGTCCCAGGATCCTGCCGAGCGAGACTTTATGGTGACTGCCATTGATCTTGTCGACGGT
CTGGTGCTCGGTCTCAAGGACAAGGCAGCTCCCTTGATGATGAACAGCGAGCCCCCATTC
ATGGAGCTGCTTCTTGTGTGCTGCCATGACGAGTTTGACGTGCGGCAATCGACATTTGCG
CTCATTGGAGACATGGCCGCCCTGTGCCCCCAGCCATTGGAGCCCTACATGGATCAGTTG
ATGGAGGAGCTGCTCAACCAGGTCGAGTACAACCACATTTGGCCTGATGCCGTCAGCAAC
ACTTGCTGGTCACTGGGAGAGATTGCTCTTCGATTCGGCGACAAGCTGCGACCTCTTCTG
CAGGCATCTGCTGCCGAGCGGCTCATTGCGCTTCTGCGAACCCGAGATGCATCGCCACGA
GTTCTGGAAAACGCTTCGACCGCCATTGGCCGAATCGGCATTACCATGCCCGACATTTTC
GCGCAGCGAATCCCAGACTTCATCATTGCCTGGTGTCTCAACATGCATGACGCCATGGAC
AACAGCGAGAAGGAAAGCGCGTTTGTGGGCATGTGCACCATCATCTCGTCCAACCCCCAA
GCCCTCGACAACTCCACCCTGCTCATGTTTGTGAATGCCGTGGCCCGATACCTGGAGCCT
AGCGAAGCGCTGATGCACACCTTTCGACAGGTGCTGGGTGGCCTCAAGGGCATGCACCCC
AATTTTGACAAGGACGTGACCGAGCAGCTGCCTCCCATCATCCAGAAGCGACTGCGTGAC
GTCTACGGCGTTTAAACTAGACTGTACCAACTACAAGCATGTACACTCCATAGCTACAAT
CACTTAATCATGCCTGGTGCGGTGGAGAAACGGCTCCCACGGATTAATAGAGCCATAGAG
AAATCAAACGATAGATGTATAACAATGACATCAAGAGTATGAACATG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F01793g_CDS-001

Protein length: 905 aa.
Product: Conserved hypothetical protein

>YALI0F01793g_CDS-001 MSWEPQPQVHAQLLEVLQNSLRGNNAAQRQATQQLREAQAQPDFANYLMAVLIDDKAGPL
DVRSSAGLLLKNLIRFDFKDLNDAGKTYVKAHVFTALVEPANIIRNTAGTIVASLMQREG
ISGWPDGLTTLMGLAESSDANAQLGGMDALSKICEDMPVELDQTYGSQRPLEYMVPKFLE
FVRSPDSSHQKRVQALTCLNHIVEVESRSIASRMDEYLEILFSLANTPDVETRIQICNAF
TGILRTNAEKIAPHLGGVIQYALHCISASEEGDTLDFQACEFLLLLTELDPNPEALSPHL
GDLVPAVLRAMVYSETDVFMLEGINEDDADVADREEDLKPINFRQKAAHGNKKNEAEGQE
PDEDESDDEEDDEVRGLEAWNLRKCAASTLDRLSNILPEEVLEAAMPYLKQTIVSDEWPA
REAAILAFGAIADGCQDMVAPHLPELVPFLIQRLSDPQFPVRQVCCWTLGRFSTWVCEQS
MSEQDTYFIPTLTGLFTCALDRNKKVQVAGCSAVATFTDEARNMLTPYLGQILEQFALCF
RRYQKKSLLFLYDAVSTLVKYCGAEIAENQQYMETLMQPLIAKWEQISDDDNALWPLFEC
MSAVASYMGPAFEPYAPPVFDRCARLLHSCLVQDQNFSNDPSQDPAERDFMVTAIDLVDG
LVLGLKDKAAPLMMNSEPPFMELLLVCCHDEFDVRQSTFALIGDMAALCPQPLEPYMDQL
MEELLNQVEYNHIWPDAVSNTCWSLGEIALRFGDKLRPLLQASAAERLIALLRTRDASPR
VLENASTAIGRIGITMPDIFAQRIPDFIIAWCLNMHDAMDNSEKESAFVGMCTIISSNPQ
ALDNSTLLMFVNAVARYLEPSEALMHTFRQVLGGLKGMHPNFDKDVTEQLPPIIQKRLRD
VYGV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG