YALI0F01738g

Overview

Description some similarities with uniprot|W1QCC2 Ogataea parapolymorpha HPODL_03868 Vacuolar segregation protein 7
Locus type CDS
Locus tag YALI0F01738g

Location

Species Yarrowia lipolytica Positions 272692..275396
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 2705 (nuc.)
Previous locus YALI0F01716g Next locus YALI0F01771g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F01738g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F01738gYALI0F01738g_mRNA-001YALI0F01738g_CDS-001

Nucleotide sequence

 

>YALI0F01738g
ATGCCCGAACCCGACAAGAGGGCCGCCGCCACAGCGGCGTCGCAGAGTCCGTCAGATCAC
GTGACCAGAATCTCCTCCACCGCCACGCCGTCTCGTCCACGCATACACACCACTCCCACC
CCACAGTCTGAGGTTCTGTTGCCCCAGCAGCCTTTGTCGGCTTCACCCACCAAGACTGAG
AGCGCGGAGCAGGCTGACAAGTACAAGACGCTCAAGGGCCGACCGGAGGAAGCAGGACCG
CCGCCCACGCCGACCATAGCGCCCGCTGCGGTCATCACACATCTGGTTCCGAAACACAAA
AAAAGCAAAACCAGACTCAAGAGCACCCCCAAGTCGAGCCCTCGAACCACACCCACCAGA
ACAACACCGTACAGGTCGTACTCCACCACAGATGAAGACCCGGAGAGTTCAGATGAAGAT
ATCGGTCCCGGATCGCTGCTAGCCGCCCAACAACGTCTGCCAATCGGAGTGCCTGACAAA
AACAGACACCCCAAGCTCAAAAGCCACGCCAGCGCTCCCGCAGTGCCCATGGCCAGAGAC
CCCAGCGGAGGAAGCGTCACTAATGGCTCTTCCGTCGGGCCTACCATCACCACAATCACT
CCTGGAGGCTACAACTCCACCCCCGGAGCTTCTACAGGCGAGTCTCTCACTAATGCATCT
TCGTCTTTGCCTGCATCGTCGCTTCCAGGTATCGCATCTGTCTCGTCACCCTCACTCCCC
ACGACTCTGCCTCCATCGTCGACTTCAAACTCAGGTACTTCTACCCCAGCAGTGCTCTCA
GACCCCGTCGTCAAGCCCCGAAAGGCATCTGCTCCTGCACCCGCCTCAAACTCGCATATT
ACCGTGGAGACAGAAACCGTGCCTGCTGTGCCCACTGTCTCCGTAGCGCCTCCGCCACCA
GTGCAGCCTCAGACTGATAGCAACAGCAACACAAACTATCAGGGCGGGTCTGTCAACTCC
ACTGTGGCGTTGTCTGGAGGCCCACAGCTGGGTTCAGGCTCCAACTCTCTAAGACTCAAG
AAGTCACAGGATGTCAAGTCGAGGAAAAAGAAGGGCAGATCCCAGCTTTCGCAGCAGGGG
AACACCAAAGCCGAAATCTTCGCGGCCAAGGTCGCTTCCGCCGTCGACGAAGTCCACTCC
TCAGACTCGGACGAAGACTTTGTATACGAGTCCAACCCCATGGAGAAGCCCACGGTGAAC
CCTCGTGCTCTTGGCGTGGCCCTAGGACCAACTGCCCGTATGGCTCGGCCCTCAGTGTCG
TCTTTATCTTCCATCGTTCACGACGAAGAAGACAACCCGGCAGTATCTGTCCCCGATCTC
AACTACGACTCGTCCTGCTCCACTACCAGTGACCACCCCGAGTTTGTCAACATGACCAAC
AACCCACGGTTCCAGTCCAGACATCCTTCTCTTTCTTCTGTGGGTAAACCCATGGGTTCG
TCTGAACGAAGAGGTATGTCTCAAGACTACTCTGATATTGAAAAGGACGGAATTCCTCTC
TTTCCGCATGATAATGGGCTCGATAGCAAGGGACAGGCGAACAGAACATTCTCTGGACCC
CCTCGAATGCCTCCTCGCCTCAACAATGCCCACTCGGGCTCTCATCTTGGCAACGACGCC
CGTAAACGCGCACCAGTCAGCAATTATGGAAGTCTACGAAACGCTGCGTCTCTCGCACGT
CTTGGAGGGGGCTCTCTGCGACGTCTGGGTTCGTATACAAAGGAAGATCCTCCTTTAGAA
CCCACCAAGACCCGCGGTACTGGAGGCTCACGACGTGGTCCTCTCGGTGGCAGCTCCAGT
GCTGGTTTTACCAACGATGAGGAGTACTACGACTTTGATGTGGATGCTGATCTCGACGAC
GAAGAGTTTGATGATGCATCAGAAAGCACTCCTCTTCGAAGGGGAGACAGCAGTCGGAGA
GTGCGTAAGAACGGGCAATTTTCTCCCCACAACTTCCATAAGAGCTCCCATCATGCTCGG
TGGCGAGGTATTCGACGAGCTATTTGGATCATGTCTTCTCTAGTGGCTGTTCTGCTCACT
GGCTTTGTGTTTGGCTTTGTGCTTGCTACAAACCGCCCCCTGCAGAACGTCAGTGTCGTG
GATATCACGGAGCTGCTCATTTCCGAGCAGGAGCTGGTGTTTGACATTGTTGTCAAGGCC
TTCAACCCCGGTATTTTGTCGGTGGTGGTGCCGTTCCTAGATATTGATGTGTTCGCCAAG
CCCATAGTGTCCAAGGACGACAAAGACGAAAAGGACAAGAACATTCTGTTGCTGGGCAAC
ATTGACGAGTTTGATGTGCCTCTGCGATTCGAGGGCGGCTTTTTCACCCGGCACGCCCAA
TCGGCCATGGGTGAGGTCCGTCTGAATGACCCCGGTGTGCCCCGTAATGCGACTCTGGAT
TCAGGAGTACCCTTGATGCTGCGGGTACCTGACAAAGACAAGGGCGACAAGGACAAGGAG
CCATTGACTCCGGAAGAGCGGTGGAAGAAGATTTGCTCCGAGCCGTTTGAGCTCATTGTT
CGCGGCGTACTCAAGTATGATCTGCCGCTGTTCCACAAGGGTCAGTCCACCACGGTTTCG
AAGAGTGTCAAGGTGACGCCACATAAAAACTAGCTATTTAATATTTATTGAGTGTATTTC
ATCTGTGTGTTATTGTTCCCTGTGGCTACAGTAGAATGTATATCTAAGATACTTGTACAG
CTTTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F01738g_CDS-001

Protein length: 871 aa.
Product: Conserved hypothetical protein

>YALI0F01738g_CDS-001 MPEPDKRAAATAASQSPSDHVTRISSTATPSRPRIHTTPTPQSEVLLPQQPLSASPTKTE
SAEQADKYKTLKGRPEEAGPPPTPTIAPAAVITHLVPKHKKSKTRLKSTPKSSPRTTPTR
TTPYRSYSTTDEDPESSDEDIGPGSLLAAQQRLPIGVPDKNRHPKLKSHASAPAVPMARD
PSGGSVTNGSSVGPTITTITPGGYNSTPGASTGESLTNASSSLPASSLPGIASVSSPSLP
TTLPPSSTSNSGTSTPAVLSDPVVKPRKASAPAPASNSHITVETETVPAVPTVSVAPPPP
VQPQTDSNSNTNYQGGSVNSTVALSGGPQLGSGSNSLRLKKSQDVKSRKKKGRSQLSQQG
NTKAEIFAAKVASAVDEVHSSDSDEDFVYESNPMEKPTVNPRALGVALGPTARMARPSVS
SLSSIVHDEEDNPAVSVPDLNYDSSCSTTSDHPEFVNMTNNPRFQSRHPSLSSVGKPMGS
SERRGMSQDYSDIEKDGIPLFPHDNGLDSKGQANRTFSGPPRMPPRLNNAHSGSHLGNDA
RKRAPVSNYGSLRNAASLARLGGGSLRRLGSYTKEDPPLEPTKTRGTGGSRRGPLGGSSS
AGFTNDEEYYDFDVDADLDDEEFDDASESTPLRRGDSSRRVRKNGQFSPHNFHKSSHHAR
WRGIRRAIWIMSSLVAVLLTGFVFGFVLATNRPLQNVSVVDITELLISEQELVFDIVVKA
FNPGILSVVVPFLDIDVFAKPIVSKDDKDEKDKNILLLGNIDEFDVPLRFEGGFFTRHAQ
SAMGEVRLNDPGVPRNATLDSGVPLMLRVPDKDKGDKDKEPLTPEERWKKICSEPFELIV
RGVLKYDLPLFHKGQSTTVSKSVKVTPHKN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG