YALI0E32395g

Overview

Description weakly similar to uniprot|P08640 Saccharomyces cerevisiae YIR019c STA1 extracellular alpha-1, 4-glucan glucosidase
Locus type CDS
Locus tag YALI0E32395g

Location

Species Yarrowia lipolytica Positions 3839198..3840814
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1617 (nuc.)
Previous locus YALI0E32373g Next locus YALI0E32417g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E32395g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E32395gYALI0E32395g_mRNA-001YALI0E32395g_CDS-001

Nucleotide sequence

 

>YALI0E32395g
ATGTCCGCAGAGAAACACGACGCCACATCGTCGGAAGACGAAACCGAACTCGAACTTGCG
CCCATCAAGTCGCCAGTGTCACCGGCTCCCAAATCGCTGCGGTCCCCGCGATCCTCGCTT
CTGCCCGTGGTCAACTCCAACCCCAATGAACGCACACAGACACAGACGCCGCCTCTGATC
CAAGGCCCGGGCTTCAACCCGGCGACACAAGCGACTGTGGTGCAGTCCAGCACGCCCACC
GCACGCACACGGGCGCTTTCGTCCTTCTCGCAGTCGTCGGACGAAAGCTCAGGCCTTGCA
CCGCCCAGTACCGGCCGAAAACGTATCAGCATGAGCTTCACTCTTCCTGTGGCCCCGTCG
CCTGACGTTATCGGCCCCGGAGACTCGCCGCCTACTCGTCCCCAACATCTGGACACGTAC
ACAGGAGCCAATCACTCGCCTACGCCATCAGGCTCGGGTCTTCGGACCTTATCTGCATCC
CGAACGACATCGACAAAGTCACCACCTCCCCAGCAGCCACAGGTGACCCAGGTGGCTGTA
GCAGAAGACCGCCCGGAACGGGGACGATCCCGAAACGCCGGATCAGGAGGACCCGGATCG
GAGGTCATGGAGTACCTGTCCCAGCTGGCCACCAAGGAGTCGCGTGTCTCCAAGCTGAGA
GAAAAGCTGCTGGAGGTCAAGAGAGAGTTGGAGAGCGCCGAGGCTGATCTCAAGCAGTTC
AAGACCAAGGACGTACTCATGCTGCATATGCCACACCGAGAAGGACAACAACCCCAGGGA
ACGCAGGAGTCGTCGCTGTTGGACTCCATCCAGACAAAGCTCATGTCTCTGGCCGTGGAA
GAGGAGCAAGAAGAGGAGGAGTCCAAGACCAAGAAAGATGTGAAAGAGGACAGTGGTACT
GTCACAGGCACCCAGAAACAACAGCACTCACGACGGGACTCAAACGGGACTCTCAAGGCT
CACAGAACGTTCAAGGCGGACACCAACAACCACGACAGTGAGATTGAGACCATGAAACGT
GACAAACGTGCTTCGCACCAGGATCAACGACCCGCTCTCAGCCATTCTTCTTCCTCGTCA
GTCTCTTCTACCCAATCCTCTGGAACCCATGTCCCCATGGAACGACGAAGAGCGTCGATT
TCGGCTCCTGGACTTCCCCCTCGAGATGACGTCATGAGCATGGGCAAGAGGGTCATTGGA
GAGATTGGCAGCCAGTTCTACGGGCTGGTGGCCGACATTCGAAGTGCCACCTTTGGGGAC
GATCTGGCCTACCAGAACCCATCGCTCAACTATGGTGGCAACAACAATATGCACCATACT
GGTGGTGGTCAGGTGGTGAATGCGCGACGAGTGAGTGGTGCGCAGCTCCGTGGAGAGGCC
AGTTCCAGTCCCAGCAGTCGTCGACGAAATGGGCGAGATGTTGTCGATAGCTATTCTTAC
ATTTGAGAAGCTCGATGGGACACAGTCGATCACACAACCAACAAGCATATGAAAGACGAG
TCAATGGACGATGTCAATTGAATGGAAGACGTTGAGTCGAAGACCGACGTCAACCAGAAG
GAAATAATGAGAATAATGAGTAGACACGGAAGTGCAATGAATGAAATGAACTATATG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E32395g_CDS-001

Protein length: 482 aa.
Product: Conserved hypothetical protein

>YALI0E32395g_CDS-001 MSAEKHDATSSEDETELELAPIKSPVSPAPKSLRSPRSSLLPVVNSNPNERTQTQTPPLI
QGPGFNPATQATVVQSSTPTARTRALSSFSQSSDESSGLAPPSTGRKRISMSFTLPVAPS
PDVIGPGDSPPTRPQHLDTYTGANHSPTPSGSGLRTLSASRTTSTKSPPPQQPQVTQVAV
AEDRPERGRSRNAGSGGPGSEVMEYLSQLATKESRVSKLREKLLEVKRELESAEADLKQF
KTKDVLMLHMPHREGQQPQGTQESSLLDSIQTKLMSLAVEEEQEEEESKTKKDVKEDSGT
VTGTQKQQHSRRDSNGTLKAHRTFKADTNNHDSEIETMKRDKRASHQDQRPALSHSSSSS
VSSTQSSGTHVPMERRRASISAPGLPPRDDVMSMGKRVIGEIGSQFYGLVADIRSATFGD
DLAYQNPSLNYGGNNNMHHTGGGQVVNARRVSGAQLRGEASSSPSSRRRNGRDVVDSYSY
I*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG