YALI0E31647g

Overview

Description similar to uniprot|A3GFI9 Scheffersomyces stipitis thioredoxin
Locus type CDS
Locus tag YALI0E31647g

Location

Species Yarrowia lipolytica Positions 3745097..3746164
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1068 (nuc.)
Previous locus YALI0E31625g Next locus YALI0E31669g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E31647g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E31647gYALI0E31647g_mRNA-001YALI0E31647g_CDS-001

Nucleotide sequence

 

>YALI0E31647g
ATGACACCAAAACCTCCTCCAACAAAACACAACTCAGCACAACACACCACCACAACCATG
AAGCTACATACAGTCACGTCTCTGGGGGAGTTTGACAAGGTGCTCAAGTCCGAGCTAGTC
ATTGTCGATTTCTTCGCAGAATGGTGCGGACCCTGCAAGGTGATTTCACCCTTTGTCGAG
ACCCTCCAGTCCGACTACAACCAGGTGCTATTTGCAAAGGTCGACGTGGATCAGGGCAAG
GACATTGCTGCCAAGTACACCGTGTCTTCCATGCCCACTTTTGTGTACTTCCACAAGGGC
AAGGAGGTCAATCGGGTCGTTGGAGCTGACAGAGCCGGAATTACTACTGGTCTAGATCAG
TTGGTTTCCCTGAACCCTGCAGCCGTCAAGTCCCTTCCTGGAGCAGGAGGCGCCGACTCT
GAGGATGCTGGCTCCACTGTCAACTCGGCTGACAACTCTGCCATCGCAGCTTTTGTGCCC
AAGAACATGGAGATTCTCAACTCTGGTATTGACTTCACCTCGACCGAGGCTCTCAACATT
GCAAACAACGGCGACGTGCGAAACGTGCTGACCAACGGGCTGTCGGGCGATCAGGAGTTT
GTCTCCGATACAGACTCGCAGATGCTGCTCAACGTGCAGCTGCAGAACAACGCCAAGATC
CAGACGATTCTGCTCAAGAAGCCCGCCGTCAGTGGTGACAACCAGATCCCCTCGCATATC
AAGGTGTGGGCCAACCATCCCAACCTGTCGTTCGACGACACCCAGTCGATCGAGGCCCAG
CATGTCGGAGATGTGGTTTTTGATGGTGAGTGGGCCGAGATCAAGCTCAGATACGTGCGG
TTCCAGAACGTGTCGACCATCTCCATGCTCATTGAGGGAGAGGACGAGGACGAGTGCACT
AATTTGGATAGAGTGGTGCTCATTGGATCAAGCGGCGAGGCTCGAAGCGGAAAGCTCGAG
AAGATGCAGGATTAGGCGGCATGGTGAATGGGTTTGAACCAGTTAATGTATATCGAGTAT
GTGCGACCCAAGCACATTGGTTAATGACATCGTAGATGTATCGTAGAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E31647g_CDS-001

Protein length: 325 aa.
Product: Thioredoxin, putative

>YALI0E31647g_CDS-001 MTPKPPPTKHNSAQHTTTTMKLHTVTSLGEFDKVLKSELVIVDFFAEWCGPCKVISPFVE
TLQSDYNQVLFAKVDVDQGKDIAAKYTVSSMPTFVYFHKGKEVNRVVGADRAGITTGLDQ
LVSLNPAAVKSLPGAGGADSEDAGSTVNSADNSAIAAFVPKNMEILNSGIDFTSTEALNI
ANNGDVRNVLTNGLSGDQEFVSDTDSQMLLNVQLQNNAKIQTILLKKPAVSGDNQIPSHI
KVWANHPNLSFDDTQSIEAQHVGDVVFDGEWAEIKLRYVRFQNVSTISMLIEGEDEDECT
NLDRVVLIGSSGEARSGKLEKMQD*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG