YALI0E31383g

Overview

Description weakly similar to uniprot|Q7S904 Neurospora crassa hypothetical protein NCU05294
Locus type CDS
Locus tag YALI0E31383g

Location

Species Yarrowia lipolytica Positions 3699566..3702312
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 2747 (nuc.)
Previous locus YALI0E31361g Next locus YALI0E31405g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E31383g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E31383gYALI0E31383g_mRNA-001YALI0E31383g_CDS-001

Nucleotide sequence

 

>YALI0E31383g
ATGAAACGAACTCGAGTGGTCAAGGAACGCACCAAGATGGGGTGTGCGACCTGCCGCAAA
CGGCGGGTCAAGTGCGACGAAACTCGGCCCGTTTGCTCCAACTGCAAGCGAGGCGAGCGC
CAATGCGACTACTCGACCCGATTCGACTTTAAGCAGACGGCACTGGCCGAATTTGGCGAG
TTCGAAAACCAGCAGAGCCAGATATCCAAGGGCTACAAGGTCGGGTTGCAACGAGATGTA
ACGCAGAACGTGTTCAACGCCCGTCTGGTGGAGACGGAAGACACCGAAGGGACCATGGTG
CCAGGAGAACAGGTCTTCAAGGTGGTCAGCGCGGATCACCAGCAACAACTACCACAACAG
GAACAAGGTCAACGACAGGAGCTTCAATATGAACAGCAAGGCCAGCAACACATACAATCT
ACATCACCACAAATACAAATCAAACCGGAGCCAGAGGAACATGCATTCAAGGTCCCTTCT
TATACGGACAAGTCGGAGCTCCGGTTTCCGCCAGCAGCTCTGGCGTCAACAGGCCAGCTC
CCCAGAGACGGCTCAGCACCTAACCCGGATTCCGCATTGCTGCCCCCTCAGCAGCTGCCG
GAGGCGCTGGAGAAGGCTGCAGCTGCCTGTGTGCCCCCACTGACGCAGTCGCATCTCACT
CTCCTGCATCGATTCGTGGCCCACCTCGGACATGAAATCCCCATGCATATGCGCCTTAGC
GGTGAACCCAACAGTCTGCTCGACGGAGTTACTCCCGCATCATACTGGACTCACGATGTG
CCCCAGATGGCCTTCTCTCAGGGCTATCTTATGAGTGCCATCTTGGCGTACTCGTCAGTG
TGTCAGTTTCCATTGTCAGAGGCTGCAAAGAGAAGCGGAATGTTCTACTACCAGCAAGCC
ATTGAAGGGCTGGCGCAGGAAATCAAGGCTAGACCAGATAGCATCAATGTAGCCGCTTGT
GTGTCGTGTTGCGTGCTCCTGACATGCTACGAAACGTACTGGGGCGATCTATCCAACTGG
TACAAGCACATGACGGGTTTGGGAGACTTTGCAAAGCTCATGGGAGCCATTCCGGGAAGC
TGGCAGCAACTCGATCTGCAATATACGGTGATTCGGTTCGAGTTTTACCAGAGCATGCTG
GGAGGAGTCGAGGGCAGATTGGGCCCTGAATACTGGCTAGGTATCCCGTCGAGGGAGGGT
AACCCTGCACTGACAGCCGGCGACGACATTTCGCGGTTGCTAATGCAAATCACGGGGTTT
GTGGCTAAACAAAACGACTTGCGTTCATCCATGGTCATCTTCGAGGGCGCGGAGGAGGTA
TGGAAGTCCCTAAAGAGCGACTTGGAGCATTTGGAGGTCAAATGGGAGCATGTTCTGCGT
CCTGTGCGTCAATCTCAGGGGATGTTTGGTGAGTATATTGAACATTCGTGTGAGGATGCC
ATGGTGGCTGCCATCCATATGCTGTTAGCCAATGTGATCCTGATCAGAAACCATCCACAC
GTCGGCACCAACCGTCTCTTCTACTTCAATCTCACGGCCGACAAGACAAAGGGGTACGTT
ACAGAGATGCTGTATCGACTGCCGGTTGATATCAAAGACTGGCTCTTCACCAACGGAGAT
AGCATCTCTCTGGACTTAACCGATATCACGTCTGTGGGTTCCAACATGGCTCGGTTGCAG
AATGTGACTCGAAAGGTGAATCGTATGTCCTCTTCCGCCTTCGAGCGGCGTCACTCCACC
GAAATGAGTCCCTCCAGCAGCGGCTCTTCCCCCTCGTCAATTTCGTCCCCAACATGTTCG
TCTCCCGCGTCGTCAACTGCTGGTTCTACTGGAGTGTACAAGCGTGGACGGCGTATCAAG
CTCCTGACCGTAGCTGTTGCTACCTTCTATGCTGCTGTTCAGATCCAGGATGCACACACA
CGGGACCTGGTGACTCGATGGTTCACAGAGGTGGCCAACGCGACCACTTGCTATTCCATC
ATCTGGTTTATCACAGGTTTGTCCGAGGCGTGGGAACGGACTGTAGAGACGGAGTATCAG
AAGTCGCTGGCCAACTACCTGCAGCAAATCAATTATGACGGTGCAGGGAACCTGTCACGT
CTGGATGAAGTGCATGCCAAGATTCGGCTAGCTCAGGGCGTGTTGGGCGATATGGCCAGT
ATTCTCAGCGAAGACCATAAGAAACTGCTGGCCAAGAGTGAAGATTGAAAGAAAAGTTAG
GGGCGTGGGAAATAAGCCAAGAGGAGAGTTACCTCGGGACCATTTCCAGTTTGCAACATT
CATGCATGGCAGATCTCGGAGAAAAAGCAGCTACTTGTACTTTTATCAACACGTCGGAGA
TTTGGGGGTGACGATAGTTATCCGAGGGACGCGACACGACATTGAGAGCAGCCTTTGCAT
CTCAGGACGGATTTCTAGACAGCCGGCAATGACGACGGCGGCAATGTTGACGAAGAGACT
TCCCTCAGCACGCGAAAAACAAAGCTAGTCTTCCGGGGTTAGTGGAGATAAATGTCCTTC
CGCTTCTCTGCAGCCCAAACACATATTGCATTTAAATTATGAAAAAGAAAGCATGGAACT
GGGGAGGAGATTGGATACTGAAACAAAAGGCAGAACAATTATTTATTATCATGCATGTAT
CGAAAGAAGTCAGCGAGCTGTGTACATACTGGTACGATTACCGGTACATAGCGGTAGAGG
AGGTGTAGAGAGCGCACACAATGGGATTCCAGTCATCTTGTCTTGAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E31383g_CDS-001

Protein length: 736 aa.
Product: Conserved hypothetical protein

>YALI0E31383g_CDS-001 MKRTRVVKERTKMGCATCRKRRVKCDETRPVCSNCKRGERQCDYSTRFDFKQTALAEFGE
FENQQSQISKGYKVGLQRDVTQNVFNARLVETEDTEGTMVPGEQVFKVVSADHQQQLPQQ
EQGQRQELQYEQQGQQHIQSTSPQIQIKPEPEEHAFKVPSYTDKSELRFPPAALASTGQL
PRDGSAPNPDSALLPPQQLPEALEKAAAACVPPLTQSHLTLLHRFVAHLGHEIPMHMRLS
GEPNSLLDGVTPASYWTHDVPQMAFSQGYLMSAILAYSSVCQFPLSEAAKRSGMFYYQQA
IEGLAQEIKARPDSINVAACVSCCVLLTCYETYWGDLSNWYKHMTGLGDFAKLMGAIPGS
WQQLDLQYTVIRFEFYQSMLGGVEGRLGPEYWLGIPSREGNPALTAGDDISRLLMQITGF
VAKQNDLRSSMVIFEGAEEVWKSLKSDLEHLEVKWEHVLRPVRQSQGMFGEYIEHSCEDA
MVAAIHMLLANVILIRNHPHVGTNRLFYFNLTADKTKGYVTEMLYRLPVDIKDWLFTNGD
SISLDLTDITSVGSNMARLQNVTRKVNRMSSSAFERRHSTEMSPSSSGSSPSSISSPTCS
SPASSTAGSTGVYKRGRRIKLLTVAVATFYAAVQIQDAHTRDLVTRWFTEVANATTCYSI
IWFITGLSEAWERTVETEYQKSLANYLQQINYDGAGNLSRLDEVHAKIRLAQGVLGDMAS
ILSEDHKKLLAKSED*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG