YALI0E31196g

Overview

Description weakly similar to uniprot|Q7SEG5 Neurospora crassa NCU03263.5
Locus type CDS
Locus tag YALI0E31196g

Location

Species Yarrowia lipolytica Positions 3675910..3681795
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 5886 (nuc.)
Previous locus YALI0E31174g Next locus YALI0E31218g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E31196g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E31196gYALI0E31196g_mRNA-001YALI0E31196g_CDS-001

Nucleotide sequence

 

>YALI0E31196g
TTCCAGCTCCTTGCCTTTCTTTCTCTGGCAAAACCCGCACCACTGCTAACCAACTGAGCC
ATATAGGCCATTACCAGTGTGAGTATTACTGGGCGACACTCACGTGAACCATTGCGTACA
CACAGACAGTTGCACCGTCAATTTGTCTATCGTACGACTTTATGACTCCACCTGACGAGC
AAGTCACCCTACTGGACAAGAACCCCCTACAATGTCTAACACAGATGAGCGACCCACACT
TTGCTTCTGGCAATCAGAACCAGGAGGTCGGGCACTCAGGCGGCCGTCCAGAAACATATT
TGGACAATGACCAGTCCCAGAGTTCCAAGTCGCAGGGGTTTGTTGACGGTGTCATGAGTT
CCGTCGGCATGGGCAATGGCGACGACTCCAAAACCAACAACAACAACAACAACAACAACA
ACAACAACAGCAACCAAGGCGCCCAACGAGCTTCCGAAGACTCCTCTAACCCTTCTCTCG
GTGACATGCCCGGACGTGTCAGTCACAAGATCCGTGACCACATTGCTCCCAACGCTGCTG
TGGTGGATGCCAACAAGAAGCCCGGTCTGTCCAAGAAGGACCGGCCCGCTGGAACCGCGT
TCCCCGTCGCCGGAGTCGCCAATCAGAATGCTGTTGACCCCAAGAAAGCCCACCACCAGC
AGAACTCGGTGCCCAACAAAGTGGACGACACCCATATCAATTCTCAGGAGCGAACTGCTG
AGCAGAAGGCAGGCGCCATCGCCGTTCCCGACAACAAGCTACCAGGAAACGCAGCCTACC
AGAAGAACTATACTCCCATGGACCGAAAGGCCACAGCTGACGAGTTTGATCTGATCCAAG
GTGGTCCCGGTGTGCCTGGCCTGTCGAGCCGAATCGAGGCTGAGGGAGAAGACAAGGGCA
AAGTGTCCGACTCAATTGATGGCGCGTACATCGAGAAGATGGCTGCCAAGAACATGGAGA
AAAATCAAATTCCCGAGCCCAAGAAGCTCGGATGGAAGCAGATGGGTGGATGGTCTGAGG
AGATGGGTATTACTTCGGACGAGCAGGCCGACGACCTCATCACCAAGTCCACTCTACTGG
AGGAGTACATTGCCAACAAGTTTTACGGCGACTGGTACCACAACATTGCCTGTATTGTGG
TGACTGGTGTGCTGTCTTTCCTTGTGGCCAAGCTCGGTGGAGGAACCGCCTGGCTGATTC
TCGTGCTTGCCGTCACCGGAACCTACTATCGAACCAGTATCCGACGACTGCGACGAAACG
TGAGAGACGACATTACTCGAGAAGCTGCTGTCAAGAGAATCGAGAGTGAGGAGGAGACCA
TGGAGTGGCTCAACCTGTTCATGGTCAAGTTCTGGGTCATCTACGAGCCCGTTCTGGCCG
CCACCGTGGTCCAGATTGGTAACCAGGTGCTTGCTGGCTCCACTCCCGGCTTCATTGAGT
CCATGGCCATTGAGTCATTCACTTTGGGAACCAAGCCCCCTCGAGTCGACCATGTTCGGA
CATTCCCCAAGACTGAGGACGACGTGTCTATCATGGACTGGAAGTTCTCTTTCACTCCCA
ACGATACCGAGGATCTGACTGCTCGACAGCTGAAGAACAAGGTCAACCCCAAGGTTGTTT
TGTCTGTCCGAATTGGTAAGGGTGTTGTCTCCAAATCTCTGCCCATCTTGCTGGAGGACA
TGTCCTTCTCCGGCCACGTACGAATCCGAATCCGAATGATGACCCTCTTCCCCCATATCC
AGACTGTCGATATTTCCTTCCTCGAGCCTCCGGACTTTGATTTCGTGCTTAAGCCCATTG
GAGGAGAGACTCTCGGTTTCGATATCAACGTCATCCCCGGCCTTACCTCTTTCATCCACG
AAATGGTCCATGCCAACATTGGTCCTATGATGTACGCCCCCAACGCCTTCCAGCTCAACG
TGCAGCAGATGCTTTCTGGCTCTGCTCTGGACTCTGCTGTCGGTGTGCTGGCTATCACTG
TCTACCGAGCCGGCAACCTCAAGGGCTCTGGTCGAATTGGCAACACAGTGGATCCCTACA
TTATTTTCTGGCTCAAGAACGAGGAATGTGGCCGAACCTCCGTCAAGAAGGATACCTGCA
ACCCCCGATGGAATGAGACCAAGTACCTGCTGGTCAACAACCTTACCGAAGTGCTGCGAA
TGGAGATTATCGATTTCAACGACTTCCGAACCGACAAGACCATTGGTTCTGTCTCCATGA
ACCTGGACACTGTCTCGGCCAAGCCCGAGCAGAAGGGTATCCATGGCGAGGTGCTGGAGG
GCCGAAAGAAGAAGGGAACTCTTATCTACGATGCCCGATGGTTCCCCGTGCTAGAGGGCA
AGACTCTGGAGGATGGTACCACCGAACCTCCGCCCGACTCCCCCTCTGGTATTCTTCGAG
TGGTCATCAACCAGTGTAAGGACCTGGATCCCAAGCTATCCATGGTTGGCCAACTGTCAC
CCTACGTCGAGCTGGCCTTCAATGGTAAGCTGCTGCACAACACCAACGTGATCAAGCGGT
CCAACAACCCCGTTTGGGACGACGCCTTTGAGTTCCTCGTCACAGACAAGGACTCGGGTA
AGGTTTCATTCACTGTCAAGGACTCTCGAGGCATGTCTTCTGATCCTGTTATTGGCAAGA
TCCAGAAGACTGTCGACGATCTGGTTGAGAGCACTGAGGATGGAGAGGACTGGCACGACT
TTGCCGACGCTGGTCGAATGCGAATCACTGCTCTCTGGAAACCTCTTGGTCTGTCTGGTG
TTGGTGGCGGCTCCGGCTACGTTGAACCCATTGGTGTGCTCCGATTCCACATCATCAAGG
CTACTGACCTGCGAAACCTCGAGACCGTCGGCAAGGTAGATCCATACGTCCGAATTCTGG
TCGGAGGATATGCCCGATGTCGAACTCGAACAATTACTGCCAACCTGGACCCTGTTTGGG
ACGAGTACATCTACGCTCCGGTCCACTCATCTCACGAGCGAATTACCGTTGAGTGTATGG
ACTCTGAGAAAGTGTCTCATGATCGATCTCTCGGTAAGTTTGAGCACCGTGCTTCTTCTA
TCATCAAGACCGATGACGATGGTAATTACGTTCCTTATGTCGACGAGAAGGGCCATGTTG
GTGAGCTTCAGCTGGGAAAGAAGTCTCCTAAGGGTAGAGTGGAGTTCTACTGCTCCTTCT
ACCCCTGTCTCCCCGTCATGTCTCCCGCCGAGCAGAAGAAGAAGGCCGAGATTGACGAGA
AGAAGGCTGCACAGGCTAAAGAGAAAGGTGTTGCTGCTTCCGTCAAGTCCGGCGCCTCCA
AGCAGGAGGGTGGTGGAGGGTGGTGGGGTGGTGGAGCTGCCAAGGAAGATCCTCAGGCTG
ATCTCAAGGCTGCGTCCAACGACAACGACGACACCGCCAAGGGTTCCGACAGTGGGGCCA
TTGACAGCACTGGTCTGGACGGCTCTGAGGGAGACAGCACTCTTAAGGCTGACACCCCTA
AGGCCATGACTCCCGAGGAGCAGAAGGCCAAGATCAAGGCCGACACTAAGGCCAAGGCTG
CTGCTGCCAAGGACAAGACCAAGGCCGCTAAGGCTGCCGATAAGGCAGGTGCCCAGAGCG
ACAATGTTAATCCCAAGTCCAAGGGCGTTGACGAAGACACCACCGAGGAGGCTGATCACC
CTGTTGGCGGTGTCGATGAATCTTCCGGTGGTGATGCTTTTGAGGGCAAGCTTGACTGGC
CTTTTGACAAGATTGTCTCCCACGACACTGGTCTGCTGCCCTTTACCATGAAGTCTTACA
AGGTAATTGGCGAGAAGGAGTGCTACCTGCAGGTGCTGTTTGACGAGTTTGCCATTCCCA
AGTGGTCGTCTGGTAAGATCAAGGAGAACAATCCCGAATGCAACGAGACTTCGGACGCCA
TGATTCGAGAGCTGTACAAGTCCAAGATTACCGTACGTTTGACTTCTCGAAAGAGCATTG
AGACTGACGAGGAGCGAAAGGAGCATCTCCTGGGGTCGCATACCATGAACACCTTTGACT
TCTTGAAGAGTTCTTACGGAAAGGACTACACCATGGCGTTTGACACGAAGCGAGGCCATT
GTGAGTGTGTCATGTCCGCCTGGTACCTGCCTTTGGAGTTCTCCATTGACCCCTGTGAGT
CCCTGGACAACATGGGCTACCTCAAAGTGTCTGTTCTGGACGCCCACGATCTGCCTGCAG
CCGATCGAAGTGGTAAGTCTGATCCTTACGCTGTCTTCGACCTCGAGGGCAAGCGTGTCT
TCAAGACCAAGACCCAAAAGAAGACTCTGGACCCGGTCTGGAACGAGTTCTTTGAGATGG
CGATATCGTCTCTGATCAAGGCCGACTTCACTGTCAACGTTTGGGATTGGGATATGGGTC
CTGCTGATGACGATTTCCTCGGAAAGGCTCGGGTCGACCTTTCCGACATTAATCCTCACG
AGGAGGCCGTCAAGGTGCTAGACCTCTTTGGTGAGGATGGAGAGCACGCTGGATCCATCC
GTCTTGCCTTCAACTTCTCGCCAGAGTACATTCCCAAGACCTGGCAGGGTAAGAGTATGA
TGAGTGGTGCCGTCGGTACCCCTGGTAAGATCATCACCTCTGTCGCTGGTGCCCCCATCA
AGGGTATTGGCTTTGTGGGCCATGGTGTGCACCGAGGAGCTTCCAAGCTCAAGCGAGCCA
TCTTTGGCCGACACAAGGACAAGGGTGACGAGGACTCTGAGGGAGAGATGCGAGAAGACC
CCAATGATGGCGAGACTCACGGTTCTGAGCACGACCTCAACGAGAGCGAGCCTGGAGTGT
CTCATTTTGGCGGTCCTTCTTCTGCTCGAAACCCCCATGCTGCTGACACTGACACTGGTG
CCACTTCTGGCCACCCTCATCTCGGTGGTGCTATGGACGGTGCTCACAATGCTGCTAGTG
CCGTTGGAGGCGCTGTTGGAGGTGCAGGTCATGCTGTTGGCGGGGCCTTCAGCGGTCTCA
AGGACAAGGTGGCAGGTCATCGAGCTGCCAACGCCAGCTACGATGACGATCCCAACGTTG
ATGTTGATGCCGTCAACGAGGGCCAAGACCAGCCTCGACGGTCTGGACTCGGTGCTCGGA
TGAAGGGCATGATGGCTTCCAACCACGAGGACGATCCCACCTCTGCTTCTCCCGTGGACT
CTGCTGATGGTCAGCAGGGTGGACATCACAGCCACAATCCTTTTGGCCGAATCGAGAGAG
ACTTCGACAAGGTTGGCTCCAAGATCAACCCCTTTAACCGAGGAGGCAACGACAAGGGTA
ACGATGGTGATCACAATCTCAAGGCTCCTGCCATGCCCGATGCTCGAAAGTCCATGGAGC
GGAAGTCTATGGACTCGCATCTGTCTCCTTCGGACACTCGAGGCAGCATCATGAGCTCTC
GAACCGGCCGAACCGGTCGAACTGGCCACTCTCGAGCCAACAGCACTGCTTCCAACCATG
GAGCTGCTGCTCTCTTCCAGGGCGAGACCTTCCCCGGTACTCTAACCATCCTTCGAGCTC
GAGGCTTTCAGGGCACCGACCGACTCCAGGTCAAGGTGTATCTGTCTGGCCGAAAGGACC
GAGAACTGTGGAAGAAGCGAATCAAACCCACTGAACGAGAGGACTATGACATTAACCAGG
AGGTGCCCTTCAAGGCCGAGCCCACGGCCAAGCTGGTCATCTCTTGTAAGGAGGATAGAA
CCTTTGGCCGATCGGAGCATTTTGGACGATGGTCGGTCAACGTGGCGGAGATCAAGAACG
GAGAGCAGGAGATTGAGTTTGGCGAGAACGGTTTCATGAAGATCAATCTTCACTTTGAGC
AGCCCGACTTGTCTGAGCGACTGAGTTGATTTTGTAAGATTTAATTGATTAATTGTGATT
ATTCCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E31196g_CDS-001

Protein length: 1875 aa.
Product: Conserved hypothetical protein

>YALI0E31196g_CDS-001 MSDPHFASGNQNQEVGHSGGRPETYLDNDQSQSSKSQGFVDGVMSSVGMGNGDDSKTNNN
NNNNNNNNSNQGAQRASEDSSNPSLGDMPGRVSHKIRDHIAPNAAVVDANKKPGLSKKDR
PAGTAFPVAGVANQNAVDPKKAHHQQNSVPNKVDDTHINSQERTAEQKAGAIAVPDNKLP
GNAAYQKNYTPMDRKATADEFDLIQGGPGVPGLSSRIEAEGEDKGKVSDSIDGAYIEKMA
AKNMEKNQIPEPKKLGWKQMGGWSEEMGITSDEQADDLITKSTLLEEYIANKFYGDWYHN
IACIVVTGVLSFLVAKLGGGTAWLILVLAVTGTYYRTSIRRLRRNVRDDITREAAVKRIE
SEEETMEWLNLFMVKFWVIYEPVLAATVVQIGNQVLAGSTPGFIESMAIESFTLGTKPPR
VDHVRTFPKTEDDVSIMDWKFSFTPNDTEDLTARQLKNKVNPKVVLSVRIGKGVVSKSLP
ILLEDMSFSGHVRIRIRMMTLFPHIQTVDISFLEPPDFDFVLKPIGGETLGFDINVIPGL
TSFIHEMVHANIGPMMYAPNAFQLNVQQMLSGSALDSAVGVLAITVYRAGNLKGSGRIGN
TVDPYIIFWLKNEECGRTSVKKDTCNPRWNETKYLLVNNLTEVLRMEIIDFNDFRTDKTI
GSVSMNLDTVSAKPEQKGIHGEVLEGRKKKGTLIYDARWFPVLEGKTLEDGTTEPPPDSP
SGILRVVINQCKDLDPKLSMVGQLSPYVELAFNGKLLHNTNVIKRSNNPVWDDAFEFLVT
DKDSGKVSFTVKDSRGMSSDPVIGKIQKTVDDLVESTEDGEDWHDFADAGRMRITALWKP
LGLSGVGGGSGYVEPIGVLRFHIIKATDLRNLETVGKVDPYVRILVGGYARCRTRTITAN
LDPVWDEYIYAPVHSSHERITVECMDSEKVSHDRSLGKFEHRASSIIKTDDDGNYVPYVD
EKGHVGELQLGKKSPKGRVEFYCSFYPCLPVMSPAEQKKKAEIDEKKAAQAKEKGVAASV
KSGASKQEGGGGWWGGGAAKEDPQADLKAASNDNDDTAKGSDSGAIDSTGLDGSEGDSTL
KADTPKAMTPEEQKAKIKADTKAKAAAAKDKTKAAKAADKAGAQSDNVNPKSKGVDEDTT
EEADHPVGGVDESSGGDAFEGKLDWPFDKIVSHDTGLLPFTMKSYKVIGEKECYLQVLFD
EFAIPKWSSGKIKENNPECNETSDAMIRELYKSKITVRLTSRKSIETDEERKEHLLGSHT
MNTFDFLKSSYGKDYTMAFDTKRGHCECVMSAWYLPLEFSIDPCESLDNMGYLKVSVLDA
HDLPAADRSGKSDPYAVFDLEGKRVFKTKTQKKTLDPVWNEFFEMAISSLIKADFTVNVW
DWDMGPADDDFLGKARVDLSDINPHEEAVKVLDLFGEDGEHAGSIRLAFNFSPEYIPKTW
QGKSMMSGAVGTPGKIITSVAGAPIKGIGFVGHGVHRGASKLKRAIFGRHKDKGDEDSEG
EMREDPNDGETHGSEHDLNESEPGVSHFGGPSSARNPHAADTDTGATSGHPHLGGAMDGA
HNAASAVGGAVGGAGHAVGGAFSGLKDKVAGHRAANASYDDDPNVDVDAVNEGQDQPRRS
GLGARMKGMMASNHEDDPTSASPVDSADGQQGGHHSHNPFGRIERDFDKVGSKINPFNRG
GNDKGNDGDHNLKAPAMPDARKSMERKSMDSHLSPSDTRGSIMSSRTGRTGRTGHSRANS
TASNHGAAALFQGETFPGTLTILRARGFQGTDRLQVKVYLSGRKDRELWKKRIKPTERED
YDINQEVPFKAEPTAKLVISCKEDRTFGRSEHFGRWSVNVAEIKNGEQEIEFGENGFMKI
NLHFEQPDLSERLS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG