YALI0E30525g

Overview

Description weakly similar to uniprot|Q7S7E7 Neurospora crassa NCU08967
Locus type CDS
Locus tag YALI0E30525g

Location

Species Yarrowia lipolytica Positions 3590167..3592201
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 2035 (nuc.)
Previous locus YALI0E30503g Next locus YALI0E30547g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E30525g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E30525gYALI0E30525g_mRNA-001YALI0E30525g_CDS-001

Nucleotide sequence

 

>YALI0E30525g
ATGAGTTTTTCGAGCAGCCGAGTCGAGGTCAGACGTGAGTATGAACAGAGAATCTCCGCC
GAGAGAAACTGAATCTCCGTCCAAAATCAGTTTCCCACAACTAACCAAGTCGATGACCCT
AAACGCTACTATTCACATGGTGACACTATTTCAGGCACGGCAGTGGTCAAGTTAAACCAA
GATGAGACCATCAAGGAGATTGTAGCCAAGTTGGAAGGTGTGGCTCGAATTGTGGTTCCT
GCCGGAAGCGTCAATGCCGAGGGTCGAGCCAAGAAGAAGGACAAGGATAAGGATAAGGAA
GCTACCGTCACTTTTCTGCACATTCAACAGGTCATTTTCCCTGATCCGAAGACATCAAGA
GTGACCTCTGGAAAGCTGACCCTCGGTGCAGGTACATATGAGTACAAATTCCGATTCAAG
ATTCCAGAAGATACTCCTGACCAAGCTCGAGGAGCTAGACTGCTCAAGGGTAAGAGTGTC
AGTCGGTTCATCGATGACATTGACCATGGACACGCCTTCTGTAACAGACTGCCTCCCAGT
ATGGCTCCCACTGCCGGAAAGGCAGCTAGCATCGACTATTTCATTAAGGTGACAGTCCAA
CGTCCCTCAGTGTTCAAGATCAACCTGAGAAACCACGACGCTTTTCTCTTCCTTCCTCTG
GATCCTCGACCTCTGAACAGTGCTGAAATGTCGCGGACTTCGTTCATCCGACGAGATCAC
AACCTGACTCTTGCTGGATTCCGACCCGATGACAACCGAGGTTTCCTCAAGAAGATGTTT
GGTTCGGGAGGAGGTAGCGATACTCCGCATTGGCACTTCTTCCTCGAGCTTCAGATGTCT
TGCCCAGTCATTGCCAAGGCCGCTCCTTTTCTCCCATTCAAGTTCCTTGTCGTCTTCGAT
CAGCCTCCGCCTCAACAGCGGTTGTTCCTGAAGGGCTTGACCATTGTTCTAGTGACCACT
TGCCAGGTTGCCATTGAGGAGTATGAACACACATTCTTCAACGAGGAGGTCATTTTCAAC
GCCACAAACTTGCCCTACACTGTGCCGCTTAACAAGGCCACTCCTGTTCCCGGACAGCCT
CGTCTCAGGGCTGCTCTGATCGATCCTAATATTTACAAGGACGCCCGAATCCCTTCGCAT
GTGTCGCCCACGTTCACTACACAAAACATTGCAAAAGCTTATGAACTGAAGGTCTCTGCT
GCCTTTTGCTTCAACGACGGTCCCGTTGAGGTCATTGAGCTACGAAAGCCCCAGGACATT
TGGTCTGGTATCAGTGCTGGATCACGCAACTACAAGGGACGACAGCCTACTTCTCCTAAC
CCTGCTGCCGTGACTGCTCCTCCCCCTGGATATCCTCCGGAGAAGAGCGGAGGTCCTCCT
GCAGGTTATCCTCCTGAGAAGGTTCGCCCGCAAGGACCCCCTTCGGGATACCCACCGGAG
AAGATGCCACCACCTAAACCCAACCGACCCCAACCTGCATCTGACCCATTGGGAGAGAAG
AGACGTCAGGAGCAGCATTATGCAGACATGGAGGAGCGAGAGTACCAACAGAGCCTGCAG
GCTGCTCTGGAAGAGAGTGCAGCTATGGCCGAGGCTCAGGGTCTTAGTGTCCCTGGTCCT
TCTTCCTCTGCTGGTCCATCTTCTGGTGCGCTGTCTTCGGCTGGTAGACCCTCCTCCAGT
ACGTCATCGTTCACTGGTTCCACTCCTGCCCCTGGAGGTCCCGGAGGCTATGCTTCACAC
ACCCCTCGACCTGCTGGGTACTCCAGCTCAACAGTAACTTCTACCAACACTGGTGGCCCC
TCATCAAGCCTCGGAGTGCCACCACATCACACTGGGTCCACCACAACGAGTACTTCCATG
GGAACCACCGTGCACACCACCGGTTCAACCATGAACACCTACTCCACCGATGCTACCATG
GTGGACCCTGTTCCTCAGGAGGGCGACGGATTGCCCAGTTACGACGAAGTGTGGAGAGAG
GGCAGATAGTATATATCAATTTTTAATTAATTAGAATAACAGCATGAGCATGTAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E30525g_CDS-001

Protein length: 638 aa.
Product: Conserved hypothetical protein

>YALI0E30525g_CDS-001 MSFSSSRVEVRLDDPKRYYSHGDTISGTAVVKLNQDETIKEIVAKLEGVARIVVPAGSVN
AEGRAKKKDKDKDKEATVTFLHIQQVIFPDPKTSRVTSGKLTLGAGTYEYKFRFKIPEDT
PDQARGARLLKGKSVSRFIDDIDHGHAFCNRLPPSMAPTAGKAASIDYFIKVTVQRPSVF
KINLRNHDAFLFLPLDPRPLNSAEMSRTSFIRRDHNLTLAGFRPDDNRGFLKKMFGSGGG
SDTPHWHFFLELQMSCPVIAKAAPFLPFKFLVVFDQPPPQQRLFLKGLTIVLVTTCQVAI
EEYEHTFFNEEVIFNATNLPYTVPLNKATPVPGQPRLRAALIDPNIYKDARIPSHVSPTF
TTQNIAKAYELKVSAAFCFNDGPVEVIELRKPQDIWSGISAGSRNYKGRQPTSPNPAAVT
APPPGYPPEKSGGPPAGYPPEKVRPQGPPSGYPPEKMPPPKPNRPQPASDPLGEKRRQEQ
HYADMEEREYQQSLQAALEESAAMAEAQGLSVPGPSSSAGPSSGALSSAGRPSSSTSSFT
GSTPAPGGPGGYASHTPRPAGYSSSTVTSTNTGGPSSSLGVPPHHTGSTTTSTSMGTTVH
TTGSTMNTYSTDATMVDPVPQEGDGLPSYDEVWREGR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG